Erik Karlsson @E_A_Karlsson
Emerging/endemic infectious diseases, mostly viruses. Pandemic Prevention. Early Warning. One Health. Science outside-the-box. Views my own. 🐘 + 🟦: eakarlsson Phnom Penh, Cambodia Joined November 2008-
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Stimulating talk on in field air sampling and metagenomic analysis of a multitude of viruses including use of drones by colleague @E_A_Karlsson closing out an excellent @IsirvEpi #NeglectedInfluenza24
In response to the H5N1 infections in cows and now a human in Texas, we've just updated our North America specific H5Nx Nextstrain build with the cow and goat sequences, which are viewable under "Species-grouped: Ruminant": nextstrain.org/groups/moncla-…. A few notes.
telegraph.co.uk/global-health/… The continuing impact of A/#H5N1 #avianinfluenza is a concern not only for #publichealth but also for #agriculture, #economics, & #trade. We need to maintain vigilant #surveillance & collaborative #research.
This is a super exciting report; it has everything from pathogen surveillance with drones to field sequencing technology.
This is a super exciting report; it has everything from pathogen surveillance with drones to field sequencing technology. https://t.co/9TJxPpEqR6
PhD CASE opportunity to join our ECOFLU work on avian influenza and other pathogens in seabirds with @SarahBurthe and @APHAgovuk via the fantastic @e3dtp . Closing date 12 noon 4th Jan. More info edin.ac/48tGRNM Please share or get in touch to find out more
Opportunity Alert! Are you a #postdoc looking to expand their #international work on infectious disease #genomic #surveillance? Consider applying for this great position with Asia Pathogen Genomics Institute #AsiaPGI at @dukenus: careers.nus.edu.sg/DukeNUS/job/DU…
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An ASFV field strain with ~1.9-kb deletion sequenced using @nanopore LSK109 cannot be stitched properly by LILO? I need your help @Amandatron89! As an alternate, I used viralWasm-Consensus (github.com/Niema-Lab/Vira…)
Make sure you stick around for the Closing Keynote! Join us at 11:00AM to hear #PennCEIRR’s Dr. Erik Karlsson talk about “The Future of Emerging (Influenza) Virus Detection: Novel Technology at High-risk Interfaces” at #NIV2024 #meetCEIRR
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Stimulating talk on in field air sampling and metagenomic analysis of a multitude of viruses including use of drones by colleague @E_A_Karlsson closing out an excellent @IsirvEpi #NeglectedInfluenza24
H13's are pretty weird, and almost exclusively found in gulls. Experimental reassortment of H13N8 with H9N2 viruses results in viruses with enhanced capacity for mammalian adaptations. 👉mdpi.com/1999-4915/16/3…
Dairy cows in Ohio have tested positive for H5N1 bird flu, making it the 6th state to report cases. The dairy operation received cows from a Texas dairy where bird flu was later confirmed.
There is no way to gloss over the concerns this recent event brings to the forefront. And there are some simple ways to reassure the public. Having spent 25 years in this space, the most critical thing we need to do today is be transparent and timely with all data and…
Dairy cows in Ohio have tested positive for H5N1 bird flu, making it the 6th state to report cases. The dairy operation received cows from a Texas dairy where bird flu was later confirmed.
H5N1 bird flu found at Texas poultry plant owned by Cal-Maine Foods, the largest producer of fresh eggs in the U.S. 1.6 million laying hens and 337,000 pullets are being culled. USDA says safely handled and properly cooked eggs are safe to eat.
Jon Cohen in @ScienceMagazine on the person in Texas who likely contracted highly pathogenic avian influenza virus H5N1 from dairy cows, and interviews with various experts on what to do about the spread of bird flu in the dairy cattle sector. #vogelgriep science.org/content/articl…
update of nextstrain showing the sequences from goats and cattle against the background of all avian flu data from GISAID. The power of data sharing. Thanks, colleagues that generated this data nextstrain.org/groups/moncla-…
Infection of cats on dairy farms with h5n1 confirmed cidrap.umn.edu/avian-influenz… cats have tested positive before
Cats showing clinical signs in Texas and/or Kansas confirmed to test positive for highly pathogenic avian influenza H5N1. #vogelgriep For more information on influenza in cats, see: mdpi.com/1999-4915/13/8… cidrap.umn.edu/avian-influenz…
Cats also involved in highly pathogenic avian influenza H5N1 outbreak in Texas and Kansas. #vogelgriep 1/2 dshs.texas.gov/news-alerts/he…
Important to remember that HPAI has different impacts on different poultry types, and that different clades have also had different impacts. Here, a careful comparison of H5N1, H5N8, H5N6, b/w 2014, 2018, 2020, 2022 for different poultry types and ages 👉mdpi.com/2076-0817/13/4…
Remember the HPAI outbreak in cats in Poland in 2023? Well, a dog was also infected. Respiratory disease signs consistent with "kennel cough" - dog did not respond to initial treatment with antibiotics, later fluA test result positive. 👉mdpi.com/2076-2607/12/4…
Having covered #H5N1 #birdflu for a very long time now, I don't like seeing it move into new species & I don't like human infections. That said, this situation — human case in Texas, caught from cows — probably isn't as unsettling as it might seem. statnews.com/2024/04/01/bir…
The human case in contact with infected cattle presented with conjunctivitis. This is a known entry point for human and avian influenza viruses. Well described for H7 viruses, it was the most common symptom in the H7N7 outbreak in The Netherlands in 2003. pubmed.ncbi.nlm.nih.gov/29477464/
In response to the H5N1 infections in cows and now a human in Texas, we've just updated our North America specific H5Nx Nextstrain build with the cow and goat sequences, which are viewable under "Species-grouped: Ruminant": nextstrain.org/groups/moncla-…. A few notes.
One health also means looking at what we can do to prevent spillovers. This paper reviews potential ecological interventions nature.com/articles/s4146…