Dr Emma Hodcroft @firefoxx66
Die Virenjägerin! 🏹🧬 Co-developer of @nextstrain! Using phylogenetics, I study viruses. I like ✈️ & 🐈 @[email protected] @firefoxx66.bsky.social emmahodcroft.com Switzerland Joined March 2009-
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Congratulations to Prof Emma Thomson (@emcat1) who has been elected as a Fellow of the Royal Society of Edinburgh (@RoyalSocEd)! Emma is an expert in infectious diseases & pandemic preparedness, and has contributed through research, advisory roles, and pandemic response efforts.
Congratulations to Prof Emma Thomson (@emcat1) who has been elected as a Fellow of the Royal Society of Edinburgh (@RoyalSocEd)! Emma is an expert in infectious diseases & pandemic preparedness, and has contributed through research, advisory roles, and pandemic response efforts. https://t.co/f3wkOkFO5z
I conducted preliminary phylogenetic analyses using H5N1 clade 2.3.4.4b genomes in North America with 2024 collection dates in GISAID. Here are some initial insights 1/7
Great to be in Hannover for #Keystone HIV & (Re)Emerging Viruses! Despite rain, it's been a great 1st day - esp. talks from Sarah Gilbert on how we can better develop test & distribute vaccines & @wendybarclay11 on how to reduce flu pandemic risk & better curb spread #KSHIVPATH24
Have thoroughly enjoyed everyone's wonderfully eclipse photos - the next best thing to seeing it myself! Vielen Dank!🙏🏻🌚🌝
With the #2024Eclipse today, those high above the clouds will have the best view. Multiple airlines have flights along the path of totality, but it looks like one will stay within the path the entire flight: @AirCanada’s #AC1070.
I have a preprint out! Evidence for extensive appearance of chatGPT/LLM derived text in scholarly papers, signalled by words that mysteriously became a lot more popular in 2023 - eg "commendable". I estimate upwards of 60,000 papers last year (& rising...) arxiv.org/abs/2403.16887
Unpopular opinion coming up. I screen a bunch of preprints for BioRxiv, have done for a decade. I think these are fairly representative of what is published generally - e.g. similar in quality, etc., even though only ~20% of papers are preprinted. /1
"For long-term sustainable software in bioinformatics" at @PLOSCompBiol doi.org/10.1371/journa…
Brief academic story. July 2022: I am encouraged to apply for a job in Germany. I apply. February 2023: A semi-cryptic email invites me to send more documents to be considered as part of the short list. Documents are essentially the same as sent in 2022, but yeah ok fine.
Assoc Prof Bioinformatician position available in Uganda via @LSHTM ! 👩🏻💻👨🏿💻🧑🏽💻To support the Unit’s high-performance computing facility – Uganda Medical Informatics Centre (UMIC) project. jobs.lshtm.ac.uk/vacancy.aspx?r…
I use this online card provider almost exclusively for this button, and wonder what else in my life I could accomplish more efficiently if only I could get "more confetti" after finishing a task... 🤔
Hey @SkyUK your customer service agent was super helpful this morning, but did just advise me to put my old *router* in the plastics recycle bin...! 😅😱🙅🏻♀️ Can you please give employees info on how to recycle electronics, so these things end up in the right place! Thanks! 😁
Aris Katzourakis @ArisKatzourakis
37K Followers 2K Following Paleovirology, cross-species transmissions, evolution, genomics, viruses, selfish genes. UCU NEC, Branch Hon Sec, Oxford Biol. Tweets mine, retweets not.
Meaghan Kall @kallmemeg
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Marc Brupbacher @MarcBrup
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Irene Tosetti, MD MBA.. @itosettiMD_MBA
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Björn Meyer @_b_meyer
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Bloom Lab @jbloom_lab
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Adam Kucharski @adamjkucharski
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Michael Wiesmann - mx.. @mxpx1981
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KONE BOÏ @boi_kone
353 Followers 3K Following Passionate about #Epigenetics & #Genetics and #Data_Sciences, PharmD, Bsc, #Open_Science, #Genomics, #infectious_diseases, #Malaria, #ComptScience, #Bioinfo🧘.
Price @price_davidsonn
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intelligence artifici.. @votreavenir2019
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LeBron Fans 👑 @LeBronJames
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E.O @e_ohiosikha
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Aris Katzourakis @ArisKatzourakis
37K Followers 2K Following Paleovirology, cross-species transmissions, evolution, genomics, viruses, selfish genes. UCU NEC, Branch Hon Sec, Oxford Biol. Tweets mine, retweets not.
Meaghan Kall @kallmemeg
62K Followers 2K Following Epidemiologist @UKHSA, mom, wife, . Born 🇺🇸 Migrated 🇬🇧. Tweet about HIV & COVID-19. #Nature10 scientist. 🏳️🌈 Personal account, obvs.
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Bloom Lab @jbloom_lab
48K Followers 1K Following Lab studying molecular evolution of proteins and viruses. Affiliated with @fredhutch @HHMINEWS @uwgenome. @jbloomlab@bsky
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Adam Kucharski @adamjkucharski
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150K Followers 2K Following @kakape.bsky.social science journalist. molecular biologist. curious. writer at @sciencemagazine part of @pandemiapodcast, all things #blue
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19K Followers 410 Following Biochemistry & Immunology | Host Immune Response, Antibody Drug & Vaccine Design | PhD @Harvard | Assistant Professor at Peking University BIOPIC
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23K Followers 1K Following Professor @KU_Leuven - evolutionary biology, theoretical biology & biostatistics. Working with #insects, #microorganisms (incl. Covid) & #humans.
Jasnah Kholin - 8964 .. @wanderer_jasnah
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Daniel Probst @skepte.. @skepteis
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Marc Johnson @SolidEvidence
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Theo Sanderson @theosanderson
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11K Followers 218 Following Inaktiver account. Ich bin aktiv auf https://t.co/iTi7C3lmkG
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Cornelius Roemer @CorneliusRoemer
39K Followers 5K Following Studying SARS-CoV-2 evolution @nextstrain @biozentrum Studied Physics @Cambridge_Uni, then learned about computers @corneliusroemer.bsky.social
Taha Y. Taha @ttaha801
283 Followers 2K Following Husband, father, virologist, pharmacist, soccer player, and chess enthusiast 🦠🧬😷 🥼 🔬⚽♞ Working on HBV and SARS-CoV-2 @TheOttLab @GladstoneInst
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960 Followers 1K Following Infectious disease epidemiologist with a particular interest in HIV and spatial analytical methods. Prof @StellenboschUni and senior faculty @AHRInews
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19K Followers 427 Following Pseudonymous osint. Every system is a sensor if you hold it right. Trying to limit myself to Baltics. https://t.co/dzlz8yLV6f backup 🇸🇪
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200 Followers 114 Following I am fewer than 160 characters. Even on my bad days.
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I make templates @imaketemplates
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Congratulations to Prof Emma Thomson (@emcat1) who has been elected as a Fellow of the Royal Society of Edinburgh (@RoyalSocEd)! Emma is an expert in infectious diseases & pandemic preparedness, and has contributed through research, advisory roles, and pandemic response efforts.
Congratulations to the nine UofG academics who have been elected as Fellows of the Royal Society of Edinburgh 👏 Nominated for their individual excellence in a wide range of fields they are joining 1,800 current Fellows of the @RoyalSocEd. Read more: gla.ac/3VN9baJ
I conducted preliminary phylogenetic analyses using H5N1 clade 2.3.4.4b genomes in North America with 2024 collection dates in GISAID. Here are some initial insights 1/7
Honoured to be elected and very grateful to group members past and present, collaborators, mentors, and family for making it possible ! @roslininstitute @EdinburghUni @RoyalSocEd
Meet our newest Fellows. We are honoured to announce the 57 leading thinkers from the sciences, arts, education, business, and public life have been elected to our Fellowship for 2024. We look forward to working with them for the betterment of society. rse.org.uk/eminent-cultur…
@firefoxx66 Have a great day Watching the sun Emma... The Encrypted Apocalyptic 👽🛸
An important study for an important phylogenetic issue: designating lineages at time of bid data @PangoNetwork @CorneliusRoemer @siamosolocani @SolidEvidence @PeacockFlu @firefoxx66 @theosanderson pnas.org/doi/10.1073/pn…
@Jean__Fisch Great thread! It made me think of one of the very first articles I wrote on Covid, it was based on a nice paper by @firefoxx66 published in smw.ch/index.php/smw/…
Hey #dengue researchers - we are building a community resource page for DENV surveillance. Please respond with links of protocols, pipelines, resources that we should include: - sequencing - PCR - bioinformatics - case data aggregation - sero assays - other useful tools
We were very lucky! It was heavily overcast but we could see glimpses of the shrinking sun every now and then. And during the 4 min totality we had two of those glimpses. We saw the black eye!
That was fun! See you next time
The PB2 gene tree is where things get interesting. There is a 10-fold change in the scale along the x-axis, demonstrating much more divergence in this gene compared to HA & NA. There are also very distinct clades on this tree 4/7
If there's any good news here, it's that most of the genomic diversity that differentiates recent mammalian samples in North America is occurring in a gene that's not one of the vaccine targets 5/7
With the #2024Eclipse today, those high above the clouds will have the best view. Multiple airlines have flights along the path of totality, but it looks like one will stay within the path the entire flight: @AirCanada’s #AC1070.
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