Matt Agboola @mattagboola
phd student @harvard researching protein design, ML, synthetic bio, & physics Joined July 2014-
Tweets686
-
Followers194
-
Following628
-
Likes2K
Use a VAE to generate functional variants of E. coli MinE that can recapitulate its natural interaction with MinD resulting in cell patterning.
Ultrasensitive Flexible Temperature Sensors Based on Thermal-Mediated Ions Migration Dynamics in Asymmetrical Polymer Bilayers #machinelearning #compchem pubs.acs.org/doi/abs/10.102…
Shocking new publication out now! A zinger from @rhyswhughes6 collabing w/ @ERG_Chem in @angew_chem. They electrochemically decarboxylated pendent Phthalimide ester-bearing polymethacrylates into otherwise inaccessible MMA-PE/PP copolymers! @UFChemistry tinyurl.com/PhthMAcoMMA
DeepRLI: A Multi-objective Framework for Universal Protein--Ligand Interaction Prediction. (arXiv:2401.10806v1 [q-bio.BM]) #machinelearning #compchem arxiv.org/abs/2401.10806
Engineered cells intelligently sense and respond to their environments with desired behaviors. We showed that de novo-designed protein binders can expand the sensing capabilities of 3 synthetic receptors, enabling new targets for engineered cells. biorxiv.org/content/10.110…
Very excited to see that our publication describing the Novel Metagenome Protein Families (NMPFamsDB) is selected among all the 180 papers across biology and neighboring disciplines featured in the 2024 Nucleic Acids Research Database issue, as the Breakthrough article of the…
De novo design of diverse small molecule binders and sensors using Shape Complementary Pseudocycles biorxiv.org/content/10.110…
Chi Hausam @ChiHausam75711
62 Followers 5K FollowingThomas Gorochowski @chofski
3K Followers 2K Following Synthetic biologist, programmer of cells, and lover of all things visual. Wakes up in the morning to learn some of natures secrets and do a spot of fly fishing.Julene Hocke @HockeJulen29062
89 Followers 5K FollowingZulema Mirafuentes @ZulemaMira19695
88 Followers 5K FollowingDee Busenbark @BusenbarkD41820
43 Followers 5K FollowingMoon Blum @moon_blum46415
37 Followers 5K FollowingIvy-rose Hallett @hallett_iv58764
109 Followers 5K Followingตาลิลลี.. @u71V0YDd8tTu07d
64 Followers 1K Following ความเซ็กซี่มีมากกว่าหนึ่งด้าน ติดตามฉันและค้นพบช่วงเวลาอื่นๆ ที่จะทำให้หัวใจคุณเต้นเร็วขึ้น! หน้าแรกของข้อมูลการติดต่อจะได้รับการอัปเดตตลอดเวลาMerna Reuland @ReulaMer
43 Followers 5K FollowingVictoria Metelus @MetelusVic40334
80 Followers 5K FollowingStorm Abrahamsen @sto_abraham
59 Followers 5K FollowingEdna Krotine @ed_krotin
80 Followers 5K FollowingLinh Schempp @linh_schem
17 Followers 3K FollowingAurelia Valiquette @AureliaVal45461
48 Followers 5K FollowingZoey Phippen @phippen_zo22831
86 Followers 5K FollowingZora Prokos @ZProkos57462
69 Followers 5K FollowingDeane Wesselhoft @DWesselhof51427
44 Followers 5K FollowingCarmelina Molon @CarmelinaM20607
82 Followers 5K FollowingKarina Slaughter @SlaughtKar
84 Followers 5K FollowingGeorgann Chelette @GeorgannC73723
82 Followers 5K FollowingPaislee Sitt @PaisleeSi
30 Followers 5K FollowingRebecca Bustamante @RebeccaBus52974
86 Followers 3K Followingくにかさちこ @kunikasach98992
2 Followers 179 FollowingAnika Mcquay @AnikMcquay
52 Followers 5K FollowingTae Seok Moon @Moon_Synth_Bio
5K Followers 2K Following YouTuber, Chief Editor, Editor of 8 journals & God believer @MIT, Prather & @Geneticdesigner, Voigt #SynBYSS https://t.co/dwhBu8YV7XJazmin Semmler @JazmSemml
32 Followers 5K FollowingMaria Maltba @MMaltba76932
41 Followers 5K FollowingOphelia Artiga @ArtigaOphe
45 Followers 5K FollowingQuirkQueenQuincy @QuincyQuir95777
4 Followers 286 FollowingNorah Adas @AdasNorah93978
54 Followers 5K FollowingRichard G. Lanzara, M.. @BBAL_TM
390 Followers 3K Following Molecular modeling, biophysics, algorithms, simulations, biochemistry, chemistry, Bio Balance, Inc.Adriana Thackston @AdrianaTha17066
42 Followers 5K FollowingStevie Janos @stev_janos
47 Followers 5K FollowingJames Olzmann @OlzmannLab
10K Followers 7K Following Associate Professor @UCBerkeley & Investigator @czbiohub. Lipid droplets, ferroptosis, ubiquitin, chembio, molecular therapeutics. Diversity, equity, inclusion.Janet @oddo_janet49
239 Followers 3K FollowingTalal Widatalla @talaldotpdb
32 Followers 120 Following Biophysics PhD @Stanford | Working on AI-Guided Molecular Generation and Design :) | Former BS @JohnsHopkins and Data Scientist @MerckJossue Ortiz-Álvarez @JossueMOrtiz
292 Followers 1K Following Microbiólogo y evolucionista 🧫🦕. Me encanta la difusión y la divulgación científica 🦠🧠🧬. SNI I. Investigador chavo . A veces me meto en política ✨.Ankur Parikh @ank_parikh
3K Followers 3K Following Staff Research Scientist at Google DeepMind. Former adjunct assistant prof at @NYU_Courant. PhD at @mldcmu. ML for Bio/Chem (Prev. NLP). All opinions my own.Kevin K. Yang 楊凱�.. @KevinKaichuang
16K Followers 5K Following Senior Researcher in BioML @MSFTResearch (@MSRNE). He/him/他. 🇹🇼Mickey Ward @Mickdub29
745 Followers 766 Following Bitcoin manifests Love. ML Scientist at @generate_biomed. PhD from WashU (w/ @drGregBowman + @foldingathome). Avid singer, runner, competitor, uncle, and friendKhmelinskaia Lab @akhmelinlab
372 Followers 153 Following The group of Protein Design 🧬 and Self-Assembly @LMU_Muenchen, GermanyIndrek Kalvet @ikalvet
489 Followers 288 Following 🇪🇪 De Novo enzyme design • HHMI Postdoc at the Institute for Protein Design at University of Washington @UWproteindesignLearning and Intellig.. @MIT_LISLab
1K Followers 245 Following PIs: Leslie Pack Kaelbling, Tomás Lozano-Pérez AI/ML/Robotics Research @MIT_CSAIL Website: https://t.co/TgsPKmvPCbICML Conference @icmlconf
70K Followers 17 Following Int'l Conf on ML • July 21-27, 2024 (Vienna, Austria) • #icml2024 • Contact: https://t.co/6saHKWV01y • https://t.co/sFwmcQNWkEMIT EECS @MITEECS
25K Followers 313 Following MIT Department of Electrical Engineering and Computer Science — we build the future.Div Garg @DivGarg9
17K Followers 99 Following Working on breaking things @MultiON_AI | RL + AI researcher | Adjunct Lecturer @Stanford CS | worked @nvidia Research, @apple SPG, @GoogleAI, @UberATGHollfelder Lab @hollfelderlab
782 Followers 101 Following Hollfelder research group @Cam_Biochem @Cambridge_Uni. Chemical and Cellular Synthetic Biology: From Mechanism to Droplet Microfluidics (and Back)cdixon.eth @cdixon
887K Followers 5K Following Programming, philosophy, history, internet, startups, crypto/web3. Author of Read Write Own. Managing Partner @a16zcrypto.Edouard Harris @harris_edouard
5K Followers 2K Following Cofounder & CTO @GladstoneAI https://t.co/aGM324ATKGHaley Bryant 💛 @haleymbryant
6K Followers 1K Following mom | principal @hustlefundvc | host @flowdotclub | 👼🏽 investorMarble @MarbleClimate
912 Followers 269 Following We partner with scientists, engineers and operators to build deeptech startups that slash emissions, remove carbon and cool the planet 🌍Shengwu Li @ShengwuLi
35K Followers 760 Following Economist. @Harvard. Mechanism design, behavioral theory.Zhuang Liu @liuzhuang1234
3K Followers 933 Following Research Scientist @MetaAI (FAIR, at NYC). machine learning, computer vision, neural networks. PhD from @Berkeley_EECSDAMP Lab @Damp_Lab
768 Followers 595 Following DAMP lab uses its expertise in synthetic biology to deliver consistent and reproducible results. We're always looking for clients and collaborators!Alec Nielsen @alectricity
3K Followers 2K Following Multicellular in Boston Co-founder & CEO @AsimovBioJason Kelly @jrkelly
24K Followers 1K Following Co-founder and CEO at Ginkgo Bioworks ($DNA)🧬 Chair of US National Security Commission on Emerging Biotechnology 🇺🇸Megan J Palmer @meganjpalmer
6K Followers 2K Following Engineering Biology at Social Scales. Senior Director of Public Impact @Ginkgo, Adjunct Professor @StanfordBioE, Advisor @iGEM, Director @Revive_Restore.Jake Wintermute 🪵 @SynBio1
11K Followers 353 Following Developer evangelist @ginkgo stay humble biodesignersMo Khalil @MoKhalilLab
8K Followers 2K Following Prof. @ Boston University and Wyss Institute. Understanding the natural world by building a synthetic one. website: https://t.co/PyjGQRHoUyTae Seok Moon @Moon_Synth_Bio
5K Followers 2K Following YouTuber, Chief Editor, Editor of 8 journals & God believer @MIT, Prather & @Geneticdesigner, Voigt #SynBYSS https://t.co/dwhBu8YV7XChristopher Voigt @Geneticdesigner
9K Followers 848 Following Composing DNA / Professor and Department Head @ MIT Biological EngineeringSebastian S. Cocioba�.. @ATinyGreenCell
24K Followers 8K Following Amateur 🌿 Biologist • Aspiring 🌺 Designer Researcher at Binomica Labs • Degreeless Heathen • Petunia Breeder • Open Lab Notebook: https://t.co/umYTLluuuwMichael C. Jewett @MichaelCJewett
7K Followers 483 Following Professor of Bioengineering, Stanford UniversityVíctor de Lorenzo @vdlorenzo_CNB
13K Followers 316 Following Environmental Microbiol meets Synthetic Biology in Southern Europe (opinions/pontifications are mine only). Long live P. putida 💪! #SinCienciaNoHayFuturoDouglas Densmore @DouglasDensmore
832 Followers 63 Following Associate professor at Boston UniversityBingxu Liu @BingxuL
462 Followers 920 Following Postdoc @UW IPD David Baker group. PhD @mit bio, Darrell Irvine lab and Nir Hacohen lab.Dawn Chen @dawnchenx
275 Followers 574 Following PhD Student @Harvard @insitubiology. ex-@Google. Nice to meet you.Harvard Alumni Associ.. @HarvardAlumni
100K Followers 9K Following The official Harvard Alumni Association account. The HAA maintains and enhances a highly engaged, vibrant community of alumni and friends worldwide.Harvard Magazine @HarvardMagazine
42K Followers 749 Following Your editorially independent source for Harvard news, arts, culture, and more. Sign up for our weekly newsletter: https://t.co/uXY0TEoKt4Oskar Staufer @OStaufer
3K Followers 346 Following Emmy Noether Research Group Leader Immuno-Materials @LeibnizWGL & @MaxPlanckBris | Combining SynBio and immunology with synthetic cells, biophysics, organoidsStartup Archive @StartupArchive_
39K Followers 1 Following We curate the top 1% of ideas from the world's best founders. Join 8,000+ others who read the free newsletter 👇Lightspeed @lightspeedvp
47K Followers 2K Following Possibility grows the deeper you go. Serving bold builders of the future.Founders Fund @foundersfund
111K Followers 170 Following technology, science, venture capital // what does the future look like?Pear VC @pearvc
14K Followers 2K Following We’re specialists in pre-seed and seed. We partner with founders at the earliest stages to turn great ideas into category-defining companies.Harvard University @Harvard
1.7M Followers 742 Following Official account for Harvard University. Devoted to excellence in teaching, learning, and research, and to developing leaders who make a difference globally.Ryan Potts @pottslab
2K Followers 351 Following VP & Head of Induced Proximity Platform, @Amgen | Scientist | FatherInflection AI @inflectionAI
49K Followers 3 Following We are an AI studio creating a personal AI for everyone. Our first is @pi, a supportive and empathetic conversational AI.Smart Biology @SmartBiology3D
61K Followers 361 Following 3D animated, interactive, biology courseware so students can truly understand. #3D #biology #education #animationTalal Widatalla @talaldotpdb
32 Followers 120 Following Biophysics PhD @Stanford | Working on AI-Guided Molecular Generation and Design :) | Former BS @JohnsHopkins and Data Scientist @MerckAnkur Parikh @ank_parikh
3K Followers 3K Following Staff Research Scientist at Google DeepMind. Former adjunct assistant prof at @NYU_Courant. PhD at @mldcmu. ML for Bio/Chem (Prev. NLP). All opinions my own.Jossue Ortiz-Álvarez @JossueMOrtiz
292 Followers 1K Following Microbiólogo y evolucionista 🧫🦕. Me encanta la difusión y la divulgación científica 🦠🧠🧬. SNI I. Investigador chavo . A veces me meto en política ✨.Lars Steinmetz @LarsMSteinmetz
2K Followers 158 Following Prof. Genetics @StanfordMed, Co-Director @StanfordGenome, Director @LiSciAlliance & Snr scientist @EMBL. Cofounder @SOPHiAGENETICS, @RecombiaBio & @levitasbioAaron Levie @levie
2.5M Followers 630 Following Lead Magician (and CEO) at Box (@box); Huge ABBA fan. I don't fully endorse anything I say below. Go ☁Ronald van Loon @Ronald_vanLoon
326K Followers 171K Following Helping AI driven companies generate value•Top10Influencer #AI #BigData #DataScience #IoT #MachineLearning #Analytics #Clouderica wenger🏕️ @erica_wenger
24K Followers 904 Following entrepreneur & investor | gp @parkrangerscap 🏕️ | nyc ambassador @brexhq | host @ dear twentysomething pod | speaker @tedx | booking inquiries [email protected]Packy McCormick @packyM
189K Followers 3K Following Not Boring || Not Boring Capital || Age of Miracles || Advisor @a16z crypto Techno-OptimistMartin Tobias (Pre-Se.. @MartinGTobias
27K Followers 1K Following Entrepreneur, Investor, Father to 3 daughters, cyclist, surfer, poker player, and life hacker. Pre-seed up to $500K. pitch me: https://t.co/pat53we2xs#Engineering is #evolution 🧐 ...perhaps? In the latest from the lab @NatureComms we explore what "#design" might mean when engineering biology and the unifying role of evolution. Work led by the brilliant @simcastle with @Michielstock #synbio doi.org/10.1038/s41467…
Physics-Informed Generative Model for Drug-like Molecule Conformers #machinelearning #compchem pubs.acs.org/doi/abs/10.102…
A programmable #antibody and DNA #aptamer switch (PANDAS) enhances analyte detection in complex samples when combined with desirable properties of both.🐼 doi.org/10.1021/acssen…
Remember that blockbuster paper recently published in Nature which claimed that there is a significant decline in the disruptiveness of scientific and technological innovation over time? The result turns out to be driven by plotting mistakes and dataset artefacts.
Is DNA all you need? Introducing Evo, a long context 7B foundation model for biology Evo has SOTA *zero-shot* prediction across DNA, RNA, and protein modalities Evo can generate DNA, RNA+proteins & make CRISPR-Cas systems for first time blog …n-model-tool-arc-institute.vercel.app/news/blog/evo
New paper from our group: we show that PCR, not sequencing, is the main source of error in bulk and single-cell expts and we correct these experimentally using UMI homoblock design. nature.com/articles/s4159…
We did 370 experiments to discover that protein language models primarily learn structure and won't scale for protein function prediction. We need new pretraining tasks! Work led by @francescazfl with @avapamini @yisongyue @alexijielu See Alex's thread + the paper for more!
Announcing our preprint understanding transfer learning for protein language models (PLMs), led by former MSRNE intern @francescazfl, with @KevinKaichuang @avapamini @yisongyue Key takeaway: PLMs do not scale for anything except structure! 🧵👇 biorxiv.org/content/10.110…
Enhancing Protein-Ligand Binding Affinity Predictions using Neural Network Potentials. (arXiv:2401.16062v1 [physics.chem-ph]) #machinelearning #compchem arxiv.org/abs/2401.16062
The dawn of a scientific revolution? Daphne Koller – Stanford professor, Coursera co-founder, one of the first and most brilliant researchers in AI – on the history and future of science: A few times in our history, a particular scientific discipline makes incredible progress…
Hunter and Yixin's paper on blending biophysics based information with neural network models for molecule/protein property prediction has come out, and with an Editor's Choice award (@HNisonoff, @yixinwang_) pubs.acs.org/doi/full/10.10…
A diffusion model that simultaneously generates sequence and structure for protein-nucleic acid complexes. @MoreheadAlex @thisismadani
BREAKING: AI Startup ElevenLabs reaches unicorn status (up from $100M) with an $80M Series B co-led by Andreessen Horowitz, Nat Friedman & Daniel Gross. Congrats to the team! > Here's their seed pitch deck
I am pleased to share our paper just published in Nature Communications, which is about a diffusion model to predict the 3D conformation of transition states from the 2D graph information of reactants and products. nature.com/articles/s4146…
The third edition of my textbook, Nonlinear Dynamics and Chaos, was published today. You can preview the first 68 pages on Google Books, or take a look at the preface below to see what's new. The main new thing is a chapter on the Kuramoto model! Hope you enjoy it.
Hydrogels are found widely across technology and in natural materials, such as in Jell-O, diapers, alginate, contact lenses or special-purpose materials engineered for drug delivery. Their extreme tunability makes them ideal candidates for complex applications; yet, we understand…
No better way to start the year than with the annual Berkeley Statistical Mechanics meeting, a great opportunity to spend the weekend learning and discussing science! Huge congratulations to @shriramc1 for winning the poster prize for his beautiful work on generative models!
I’m excited to share our work developing an antibody-directed strategy for delivering genome engineering tools to specific cell types, both outside and inside the body 🎯
In vivo human T cell engineering with enveloped delivery vehicles go.nature.com/47vW1Rp
Predictive Models and Impact of Interfacial Contacts and Amino Acids on Protein–Protein Binding Affinity #machinelearning #compchem pubs.acs.org/doi/abs/10.102…
I’m excited to share that we’re entering a strategic research collaboration with Isomorphic Labs to use state-of-the-art #AI technologies—including the next-gen model of AlphaFold—to discover novel small molecule therapeutics for select biological targets. storage.googleapis.com/isomorphiclabs…