Yifan ZHOU @yifanZHOU96
PhD student at Institut Pasteur | Archaeal Virology | metagenomics/metaviromics | AOA | Haloarchaea Paris, France Joined July 2022-
Tweets120
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Followers104
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Following250
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Yifan ZHOU retweeted
Enhancing genome recovery across metagenomic samples using MAGmax academic.oup.com/bioinformatics…
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Yifan ZHOU retweeted
Phages with a broad host range are common across ecosystems | Nature Microbiology nature.com/articles/s4156…
Yifan ZHOU retweeted
Structural motif search across the protein-universe with Folddisco | bioRxiv biorxiv.org/content/10.110…
Yifan ZHOU retweeted
Out Now! Learning ecosystem-scale dynamics from microbiome data with MDSINE2 bit.ly/3K0yguN #Microbiome #BayesianStatistics #EcosystemDynamics
Yifan ZHOU retweeted
MAGdb: a comprehensive high quality MAGs repository for exploring microbial metagenome-assemble genomes | Genome Biology | Full Text genomebiology.biomedcentral.com/articles/10.11…
Yifan ZHOU retweeted
Learning ecosystem-scale dynamics from microbiome data with MDSINE2 | Nature Microbiology nature.com/articles/s4156…
Yifan ZHOU retweeted
A workflow for statistical analysis and visualization of microbiome omics data using the R microeco package. #Microbiome #OmicsData #DataAnalysis #R @NatureProtocols nature.com/articles/s4159…
Yifan ZHOU retweeted
New online! Clinical metagenomics for diagnosis and surveillance of viral pathogens nature.com/articles/s4157…
Yifan ZHOU retweeted
DPANN Archaea and CPR Bacteria: insights into early cellular evolution? royalsocietypublishing.org/doi/10.1098/rs…
Yifan ZHOU retweeted
Protein Structure Informed Bacteriophage Genome Annotation with Phold | bioRxiv biorxiv.org/content/10.110…
Yifan ZHOU retweeted
Flourishing chemosynthetic life at the greatest depths of hadal trenches | Nature nature.com/articles/s4158…
Yifan ZHOU retweeted
New online! Hunting archaeal viruses nature.com/articles/s4157…
Yifan ZHOU retweeted
An Asgard archaeon from a modern analog of ancient microbial mats biorxiv.org/content/10.110… #biorxiv_micrbio
Yifan ZHOU retweeted
Viromics approaches for the study of viral diversity and ecology in microbiomes | Nature Reviews Genetics nature.com/articles/s4157…
Yifan ZHOU retweeted
piqtree: A Python Package for Seamless Phylogenetic Inference with IQ-TREE | bioRxiv biorxiv.org/content/10.110…
Yifan ZHOU retweeted
SSAlign: Ultrafast and Sensitive Protein Structure Search at Scale | bioRxiv biorxiv.org/content/10.110…
Yifan ZHOU retweeted
Leviathan: A fast, memory-efficient, and scalable taxonomic and pathway profiler for next generation sequencing (pan)genome-resolved metagenomics and metatranscriptomics biorxiv.org/content/10.110…
Yifan ZHOU retweeted
TreeHub: a comprehensive dataset of phylogenetic trees nature.com/articles/s4159… 🧬🖥️🧪 github.com/wpwupingwp/tre…
Yifan ZHOU retweeted
SVbyEye: A visual tool to characterize structural variation among whole-genome assemblies academic.oup.com/bioinformatics… 🧬🖥️🧪 github.com/daewoooo/SVbyE…
Yifan ZHOU retweeted
🚨 new paper alert! science.org/doi/10.1126/sc… During my PhD, one of the most frustrating challenges was trying to interpret genes labeled as “hypothetical proteins.” 1/n
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