International Brain Laboratory @IntlBrainLab
Experimental & theoretical neuroscientists collaborating to understand brainwide circuits for complex behavior. Mastodon: @[email protected] internationalbrainlab.com Joined November 2016-
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I found the main bug and fixed it (see new releases). This affects versions 2.5 and 3. Thanks to the @IntlBrainLab for finding this problem. Good time to upgrade to Kilosort4 :) ? The #pytorch implementation should be immune from such issues. #kilosort github.com/MouseLand/Kilo…
I found the main bug and fixed it (see new releases). This affects versions 2.5 and 3. Thanks to the @IntlBrainLab for finding this problem. Good time to upgrade to Kilosort4 :) ? The #pytorch implementation should be immune from such issues. #kilosort github.com/MouseLand/Kilo… https://t.co/wUkZBKTHOq
Come see us at #SFN23 #SFN2023 #SFN sites.google.com/internationalb…
Going to SfN this year? Join us for a workshop on how to use our Brainwide Map dataset to test your own hypotheses! For more information and to register, visit internationalbrainlab.org/sfn2023
Kording —-& Lab �.. @KordingLab
42K Followers 4K Following Konrad kording, @Penn Prof, deep learning, brains, #causality, rigor, https://t.co/tTJW05RjpC, https://t.co/qf7ZHxiCUt, Transdisciplinary optimist, Dad, Loves outdoors, 🦖Earl K. Miller @MillerLabMIT
36K Followers 2K Following Picower Professor of Neuroscience at MIT https://t.co/UoEeD2FzEY https://t.co/GJDAccXAW8 https://t.co/my1do6xTn1Kay M Tye PhD @kaymtye
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2 Followers 51 FollowingKording —-& Lab �.. @KordingLab
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5K Followers 842 Following The Sainsbury Wellcome Centre aims to discover the fundamental principles of how the brain drives behaviour. Based at @ucl, funded by Gatsby and @wellcometrust.Dan Levenstein @dlevenstein
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3K Followers 185 Following Co-founder, CEO at @Altera_AL, Computational Neuroscientist, former Assistant Professor @mitbrainandcog & @MITEECSI found the main bug and fixed it (see new releases). This affects versions 2.5 and 3. Thanks to the @IntlBrainLab for finding this problem. Good time to upgrade to Kilosort4 :) ? The #pytorch implementation should be immune from such issues. #kilosort github.com/MouseLand/Kilo…
There's a bug in Kilosort 🚨 The @IntlBrainLab found spike holes: every 2s no spikes are detected for 7 ms. Although it's a small fraction of data (0.3%), it's good to be aware of this issue. Also consider rerunning spike sorting after it's been resolved. github.com/MouseLand/Kilo…
There's a bug in Kilosort 🚨 The @IntlBrainLab found spike holes: every 2s no spikes are detected for 7 ms. Although it's a small fraction of data (0.3%), it's good to be aware of this issue. Also consider rerunning spike sorting after it's been resolved. github.com/MouseLand/Kilo…
I am beyond excited to present the first preview of the Brain Wide Map dataset at the #Neuropixels Symposium at #SfN22. We will dive deep into 194 brain areas of mice making decisions, although we will only scratch the surface of this enormous dataset. Wed Nov 16, 2:55pm, SDCC 6B
🚨 BIG DATA RELEASE 🚨 We are beyond excited to announce the release of our Brain Wide Map of neural activity during decision making! It consists of 547 Neuropixel recordings of 32784 neurons across 194 regions of the mouse brain 🐭🧠 (1/7)
An analytical tour de force by @YanliangShi dissects the relationship between spatial and temporal correlations in networks with structured connectivity, in our new preprint w/ @roxana_zeraati & @SelfOrgAnna: arxiv.org/abs/2207.07930
Excited to share our new preprint on how network dynamics and structured connectivity jointly define the spatial and temporal profiles of neural correlations. Work w/ @roxana_zeraati, @SelfOrgAnna, @EngelTatiana: arxiv.org/abs/2207.07930 Here is a #tweeprint:
What does serotonin do in the brain? If you're at #SfN2022, check out @JoanafaCatarino's poster where she will present our work on the effects of serotonin stimulation on neural dynamics across the mouse brain 🧠 📅 Tuesday afternoon, poster board TT7
Amazing achievement. Technical. Social. Scientific.
🚨 BIG DATA RELEASE 🚨 We are beyond excited to announce the release of our Brain Wide Map of neural activity during decision making! It consists of 547 Neuropixel recordings of 32784 neurons across 194 regions of the mouse brain 🐭🧠 (1/7)
Looks like Stevenson’s law is being overcome. Amazing achievement.
🚨 BIG DATA RELEASE 🚨 We are beyond excited to announce the release of our Brain Wide Map of neural activity during decision making! It consists of 547 Neuropixel recordings of 32784 neurons across 194 regions of the mouse brain 🐭🧠 (1/7)
Congratulations to all involved! Outstanding community resource
🚨 BIG DATA RELEASE 🚨 We are beyond excited to announce the release of our Brain Wide Map of neural activity during decision making! It consists of 547 Neuropixel recordings of 32784 neurons across 194 regions of the mouse brain 🐭🧠 (1/7)
Proud to be a part of this collaboration! Herculean effort from the team.
🚨 BIG DATA RELEASE 🚨 We are beyond excited to announce the release of our Brain Wide Map of neural activity during decision making! It consists of 547 Neuropixel recordings of 32784 neurons across 194 regions of the mouse brain 🐭🧠 (1/7)
Really proud to be part of this team effort 🧠🐀
🚨 BIG DATA RELEASE 🚨 We are beyond excited to announce the release of our Brain Wide Map of neural activity during decision making! It consists of 547 Neuropixel recordings of 32784 neurons across 194 regions of the mouse brain 🐭🧠 (1/7)
Interesting discussion on neurophysiology data standards going on. Here are some thoughts. What follows is not a criticism of the NWB format, which has hugely benefitted our field. As part of the team that designed NWB1.0, I can even share some credit for it.+
For something that was supposed to revolutionize data sharing, the NWB format is fairly difficult to navigate through and seems to allow plenty of arbitrary formatting decisions.
@neuralreckoning COLLABORATION. Like @IntlBrainLab but x1000000. Scientific endeavours are big and long-term, spanning countries, planets, solar systems, and no individual has to prove they did the work "independently".
2-photon imaging goes freely-moving! We are releasing @TheMini2P, a 2.4g portable #twophoton 🔬 for fast multiplane calcium imaging of 1000s of neurons in behaving 🐭! Fully open-access. Now it is time to study natural behaviors! By @WikiZong et al @KISNeuro #KiloNeurons #ERCSyG
Meet @TheMini2P, an #OpenSource brain explorer for large-scale two-photon calcium imaging in freely moving mice. By @WikiZong @HorstObenhaus @EmilieSkytoen @HannaEneqvist @NienkeLdeJong @MarinaRJorge @MayBrittMoser @EdvardMoser at @KISNeuro 👉 cell.com/cell/fulltext/…
A documentary about the brain by Jean-Stephane Bron featuring Christof Koch, @zmainen, yours truly, @IntlBrainLab and others. Now out in movie theaters in Switzerland.
New at SCGB news: Four years into its run, the International Brain Lab, a collaboration among 22 labs, is demonstrating a novel approach to team-based neuroscience. simonsfoundation.org/2022/01/26/bui…
The @IntlBrainLab has posted a dandiset! This means that data from IBL experiments is placed in NWB format and made publicly available here: gui.dandiarchive.org/#/dandiset/000… Having data in standardized form makes using shared analysis easier @BenDichter @NeurodataWB @nbonacchi #OpenData
The Steinmetz Lab at UW Seattle and the International Brain Laboratory (@IntlBrainLab) seek a research scientist to join our large-scale global collaboration. Read on for details -
How do mouse brain-wide population codes perform hierarchical inference? If you're interested in Bayesian inference/recurrent networks/testing predictions in Neuropixels recordings, come to our #SfN21 #SfN2021 poster today at 11:30 AM PT! Joint w/ @IntlBrainLab #neuroscience
Also thanks to @AnneEUrai for helpful discussions on the behavioral setup and to the @IntlBrainLab for establishing standardized approaches that facilitate and make possible integrative research in cognition and decision behavior!! 👏🙏