Macas lab @MacasLab
Interested in DNA repeats, centromeres, plant genomics and bioinformatics. Located at the @BiologyCentre of the Czech Academy of Sciences. Member of @ELIXIRCZ w3lamc.umbr.cas.cz/lamc/?page_id=… České Budějovice Joined December 2019-
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Great collaboration led by Houben Lab on atypical centromeres and kinetochores in #Chionographis and #Chamaelirium plants: doi.org/10.1101/2025.0…
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The program of the 12th @RepeatExplorer Workshop (May 27-29) is online: repeatexplorer.org/?page_id=1423
A new genome assembly of the pea cultivar Cameor provides resources for functional genomics and genetics: doi.org/10.1101/2025.0…
Registration open to the 12th @RepeatExplorer Workshop (May 27-29), this year focusing on repeat annotation in genome assemblies ! repeatexplorer.org/?page_id=14
Macas lab retweeted
🥳Happy 🥳to share the final version now officially published in @NatureComms Repeat-based holocentromeres of the woodrush Luzula sylvatica reveal insights into the evolutionary transition to holocentricity nature.com/articles/s4146… Awesome work from @YMata_Sucre and Marie Krátká
🥳Happy 🥳to share the final version now officially published in @NatureComms Repeat-based holocentromeres of the woodrush Luzula sylvatica reveal insights into the evolutionary transition to holocentricity nature.com/articles/s4146… Awesome work from @YMata_Sucre and Marie Krátká
Excited to share our tools for LTR-retrotransposon annotation in plant genomes ! Supported by @ELIXIRCZ. doi.org/10.1093/nargab…
DANTE and DANTE_LTR: computational pipelines implementing lineage-centered annotation of LTR-retrotransposons in plant genomes. doi.org/10.1101/2024.0…
Macas lab retweeted
🔥Thrilled to announce our recent work🔥 Repeat-based holocentromeres of the woodrush Luzula sylvatica reveal new insights into the evolutionary transition from mono- to holocentricity Now on bioRxiv: biorxiv.org/content/10.110… Congrats on great work from @YMata_Sucre @KratkaMarie
Now published in Chromosome Res. rdcu.be/dzBlk
Now published in Chromosome Res. rdcu.be/dzBlk
Macas lab retweeted
🚨BREAKING: Over 1,000 scientists in 14 countries hold historic demonstrations in support of gene editing. The scientists are urging MEPs to back New Genomic Techniques (#NGTs) ahead of a crunch vote in the EU parliament tomorrow. Please like and share if you believe in…
Targeting conserved regions of #kinetochore proteins KNL1 and NDC80 provides antibodies for labeling #centromeres across a spectrum of seed plants ! Great work by @LudCris & @PavelNeumann7 in collaboration with @YiTzuKuo, @YMata_Sucre and @marques_et_al. doi.org/10.1101/2023.1…
Macas lab retweeted
📢 Hey REPET users ! A new version of the Docker #REPET image is available! hub.docker.com/r/urgi/docker_… It includes the REXdb (@MacasLab) and Dfam (@isbsci) databases formatted for REPET use to improve the classification of your #Transposons reference library.
Macas lab retweeted
Great collaboration with Andreas Houben @YiTzuKuo and @MacasLab now published online in @NatureComms. Here we show that holocentromeres can also consist of only a few centromeric units with megabase-sized repeat arrays in similar ranges as in monocentromeres! Crazy!
Great collaboration with Andreas Houben @YiTzuKuo and @MacasLab now published online in @NatureComms. Here we show that holocentromeres can also consist of only a few centromeric units with megabase-sized repeat arrays in similar ranges as in monocentromeres! Crazy!
A new type of plant holocentromere ! Excited to be part of a great team led by Houben lab at @LeibnizIPK, including @YiTzuKuo, @marques_et_al and many others. Supported by #GACR, @BiologyCentre and @ELIXIRCZ. doi.org/10.1038/s41467…
Macas lab retweeted
Fantastic #RepeatExplorer workshop organized by @MacasLab. A huge thank you to our special guest @JohannConfais from @INRAE_URGI for his captivating presentation on REPET. Thanks to the backing of @ELIXIRCZ & @ELIXIREurope, this event marked the beginning of a new collaboration.
Closing a busy day at the @RepeatExplorer workshop !
Our paper on aberrant kinetochores of #holocentric #Cuscuta plants just published in PNAS journal! Great work by @PavelNeumann7, @LudCris and collaborators! Supported by @ELIXIR_CZ and @BiologyCentre. doi.org/10.1073/pnas.2…
Macas lab retweeted
Big step forward for faba bean!! Genome sequence published in Nature. Many @ProFaba_SusCrop @suscrop partners involved. go.nature.com/3Li9kgO
Big step forward for faba bean!! Genome sequence published in Nature. Many @ProFaba_SusCrop @suscrop partners involved. go.nature.com/3Li9kgO https://t.co/3LGsvuPHSZ
Happy to be a part of this great team ! Supported by #GAČR, @ELIXIRCZ and @BiologyCentre
Happy to be a part of this great team ! Supported by #GAČR, @ELIXIRCZ and @BiologyCentre
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