Search results for #RootPainter
Roots of both barley sp grew faster with disturbed soil microbiome providing evidence of their abilities to partially compensate for the lack of microbial help by self-exploration/exploitation. thanks to @LarryMattYork @ASeethepalli for @RhizoVision and @Abe_404 for #rootpainter.
Great talk at the @isdsc8 by @H_Poppy_Clark on how we can learn about future change from studying past coral-sponge interactions #MachineLearning #CNN #RootPainter
Packed #RootPainter for marine biology workshop at #ISDSC8 with excellent delivery from @H_Poppy_Clark and @LDeClippele
New #RootPainter Release 0.2.27 github.com/Abe404/root_pa… Highlights: - Image resizing - Annotation time/clicks and model name logged in metrics (@TomkeSue, @tacobanet) - Contrast enhance - View brush size - Bug fixes and local exception logging Feedback and bug reports welcome :)
The free and open source #RootPainter software developed by @Abe_404 is extremely useful for data extraction from all types of images. I was able to train RootPainter to segment (red) roots and shoots from hundreds of images of germinated wheat seeds for downstream analyses!
Thanks to Abe for continued development of #RootPainter and for being a team player towards developing an ecosystem of open tools for roots! 👏
Thanks to Abe for continued development of #RootPainter and for being a team player towards developing an ecosystem of open tools for roots! 👏
New #RootPainter Release 0.2.25 github.com/Abe404/root_pa… Highlights: - Assign annotation to segmentation using extras menu option for @TomkeSue - Segmentation directly compatible with @RhizoVision for @BenjaminDelory - Handling dataset renaming Thanks for the help @rohan_orton
Analysis of Stomatal Imprints with #RootPainter in "The Chlorophyll Fluorescence Parameter Fv/Fm Correlates with Loss of Grain Yield after Severe Drought in Three Wheat Genotypes Grown at Two CO2 Concentrations" mdpi.com/2223-7747/12/3… by Søren Gjedde Sommer, @EusunHan et al
@Abe_404 Congrats! You've already made a big impact with #RootPainter, really glad you're able to continue development!
@LarryMattYork Thanks! Yes, this also means I can continue to develop and support #RootPainter and the projects that benefit from it.
Our 3 year postdoc application 'Interactive deep learning for image segmentation' to Novo Nordisk Fonden has been granted. We will further investigate corrective-annotation and develop human-in-the-loop methods to better train and validate segmentation models #RootPainter
Learning #rootpainter at @KU_PLEN @ICRISAT
Our first 2022 workshop with @Abe_404 #RootPainter was a great success. Thanks to all attendees! We are thrilled to have attracted such a broad audience. You can still watch the recording on our youtube channel youtube.com/channel/UCJ_ZX… Today 2nd workshop! check 🧵 to register
we did some work on this but then this amaing paper came out in preprint - doi.org/10.1111/nph.18… and I happily switched to #rootpainter for my image analysis. Big thanks @Abe_404
A step-by-step tutorial on how to get started with #RootPainter is also available on YouTube thanks to @Abe_404 and @ForcePhenome 🥳 youtube.com/watch?v=73u73t…
If you are interested in combining #rootPainter and @RhizoVision to analyse #root images, we put together a dataset consisting of unprocessed and segmented #minirhizotron images for you to try these software tools. You can download them here: doi.org/10.5281/zenodo…
Fab start of the season with #RootPainter thank you @Abe_404 for a fantastic #workshop now available in youtube youtu.be/73u73tBvRO4 Next Friday we continue #phenotyping #roots with @BenjaminDelory 🗓️28th October 4 pm CEST Register👇 eventbrite.com/e/phenome-forc… @eventbrite