@Aiims1742 @MDAndersonNews @HaymakerCa15357 Single-cell spatial tech showdown! 🔬 CosMX, MERFISH, Xenium—each has strengths, but no one-size-fits-all. Factors like archival block age really influence results. Great comparison from @MDAndersonNews! #SpatialOmics #SingleCell

Join GESTALT @GESTALT_sp Let us learn #SpatialOmics together!😆 globalspatial.org @DrJasPlummer @ioavlachos @LGMartelotto @NatureGenet 2025 nature.com/articles/s4158…

🚀Save the Date! Join our exciting webinar series on the STOmics Stereo-CITE Proteo-Transcriptomics Solution. Discover how this spatial omics tech can supercharge your research. Oct 21 & 22, 4 PM GMT+8. Register: bit.ly/4nowKSb #STOmics #SpatialProfiling #SpatialOmics

🫀 New study in STTT: Stereo-seq + snRNA-seq mapped fulminant myocarditis, revealing mesothelial cells as early viral targets & IVIG improved survival—showing the power of spatiotemporal omics. 🚀✨ 🔗 doi.org/10.1038/s41392… #StereoSeq #SpatialOmics #CardioResearch

Weekly reads 15/09/22 🧬 DNA methylation as both cancer driver & evolutionary clock 🧫 SPACE brings CRISPR screens into 3D tissues 🤖 AI designs functional phages 🧠 SCLC plugs into brain circuits open.substack.com/pub/behindtheb… #Cancer #SingleCell #SpatialOmics #AI #Epigenetics

🔬 Perfect for #singlecell and #spatialomics analysis! The 🐍 #Python client plugs directly into @scverse_team. Use OmniPath with tools like decoupler.readthedocs.io and liana-py.readthedocs.io for pathway activity prediction, automated cell annotation, cell-cell communication ...

HAPPENING TOMORROW! You won't want to miss it 🧬 #Xenium #Visium #SpatialOmics #SpatialTranscriptomics

Gregory Lab @TheGregoryLab

4 weeks ago

HAPPENING TOMORROW! You won't want to miss it 🧬 #Xenium #Visium #SpatialOmics #SpatialTranscriptomics

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🚀Our @mellowescenter team is in Madison for Cells in Context: Single-Cell & Spatial Transcriptomics Symposium!🧬Excited to share, learn & connect with leaders pushing discovery forward! #SingleCell #Spatialomics shorturl.at/ThMHI

🧬🌌 Mapping biology like never before! Spatial omics is shaping the next-gen of precision medicine 🔥 #SpatialOmics #Genomics #PrecisionMedicine marketresearchfuture.com/reports/spatia…

Wang et al. developed wellDR-seq for co-profiling single-cell whole genomes and transcriptomes at scale and analyzed 33,646 single cells from 12 estrogen-receptor (ER)-positive breast cancers to understand disease progression ➡️ cell.com/cell/abstract/… #SingleCell #SpatialOmics

🔬 CZI Workshop at scverse 2025 🔬 Multimodal And Spatial Single Cell Data: From Data APIs to AI-driven Biological Discovery 🧵 @ChanZuckerberg #scverse2025 #SingleCell #SpatialOmics #CELLxGENE #VirtualCells #AIBiology

Rohan Misra … Deyou Zheng created an online server for the community to upload their single cell data and interactively make UMAPs with different hyper-parameters to witness how the distribution of cell clusters changes. ➡️ biorxiv.org/content/10.110… #SingleCell #SpatialOmics

Henry et al. generated a comprehensive map of cell type-specific causal gene-trait relationships across 28 peripheral immune cell types and 100 complex traits by integrating population-scale sc-eQTL data with GWAS ➡ medrxiv.org/content/10.110… #singlecell #spatialomics

SPEX: A modular end-to-end platform for high-plex tissue spatial omics analysis. #SpatialOmics #SingleCell #SpatialAnalysis @GigasSience academic.oup.com/gigascience/ar…

From nerve damage that blocks #Immunotherapy to mitochondria hand-offs, mechanical squeezing, & smarter spatial integration—this week’s weekly reads show cancer is a master of tricks 🧠🧬 #CancerResearch #SpatialOmics #CompBio open.substack.com/pub/behindtheb…

The Tabula Sapiens Consortium … Stephen Quake reported Tabula Sapiens 2.0, which includes data from nine new donors, doubles the number of cells in Tabula Sapiens, and adds four new tissues. ➡️ biorxiv.org/content/10.110… #singlecell #spatialomics #spatialbiology

Yu Zhao ... Xun Xu introduced Stereo-seq V2, which employs random primers to capture and sequence RNAs in situ on FFPE sections and provides single-cell resolution. ➡️ cell.com/cell/fulltext/… #singlecell #spatialomics #spatialbiology #spatialtranscriptomics