Liam Revell @phytools_liam
Evolutionary biologist, R developer, & occasional heterodox. Tweets mostly about phylogenetics... but sometimes speech, the academy, politics, & COVID. faculty.umb.edu/liam.revell/ Providence, Rhode Island Joined May 2013-
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Following2K
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I'm surprised it took me a full day to pick up on this.... From @StandardDevs writing for @washingtonpost, "A Modest Proposal: How to fix college finances? Eliminate faculty, then students." washingtonpost.com/opinions/2024/…
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Just about a week left to submit a talk on reproducibility in ecology & evolution to the symposium that @itchyshin (Shinichi Nakagawa) & I have organized for #Evol2024 @Evol_mtg in Montreal this summer! Check out my blog for relevant links & more info: blog.phytools.org/2024/03/evolut….
Just about a week left to submit a talk on reproducibility in ecology & evolution to the symposium that @itchyshin (Shinichi Nakagawa) & I have organized for #Evol2024 @Evol_mtg in Montreal this summer! Check out my blog for relevant links & more info: blog.phytools.org/2024/03/evolut….
Perhaps of interest to some followers.... Tricks & tips for pruning a mega-phylogeny to include only the taxa in a smaller list in which taxon labels don't match exactly using #Rstats #phytools (& ape, of course): blog.phytools.org/2024/04/prunin….
I 𝘤𝘳𝘦𝘢𝘵𝘦𝘥 a (mostly unimpactful) COVID data aggregator/tracker -- largely with the objective of contextualizing risk & age-stratification (e.g., this 🧵 x.com/phytools_liam/…). I nonetheless voted "Harmful!" 😳 without any doubts about where I come down on this poll.
I 𝘤𝘳𝘦𝘢𝘵𝘦𝘥 a (mostly unimpactful) COVID data aggregator/tracker -- largely with the objective of contextualizing risk & age-stratification (e.g., this 🧵 x.com/phytools_liam/…). I nonetheless voted "Harmful!" 😳 without any doubts about where I come down on this poll.
Liam Revell retweeted
I'll be defending my PhD thesis this Tuesday (April 23)! It will happen at 10 am EST and the presentation will be live-streamed here: youtube.com/channel/UC38Vx… 🦎
Looking for some old notebooks and found this evidence of my age... physical journal reprints from a couple of my early pubs with @lukejharmon.
Love to see a phylogeny in this talk by @EliezerCalo at @UMassBoston.
Liam Revell retweeted
A simple (too simple?) method of creating a split x-axis graphed phylogeny using #Rstats #phytools: blog.phytools.org/2024/04/a-simp…
Another post about doing multiple optimization iterations of #phytools fitMk using the 'foreach' #Rstats package: blog.phytools.org/2024/04/anothe…. (Plot shows best-fitting model & next eight from 20 optimization iterations.)
Liam Revell retweeted
Thank you for this new function, @phytools_liam! Amazing! #phytools #paleontology
Liam Revell retweeted
Daria uma bela tatuagem.
Kory Evans Ph.D. #2 @Sternarchella
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talia εїз 🇵🇸 @sappily8
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27K Followers 2K Following Contributing Writer @TheAtlantic. Teaching @BatesCollege. Professional Doom-Monger. Co-host of Time to Say Goodbye @ttsgpod. Red-Blooded Lacanian Male.
DMB Live Setlist @dmblive
33K Followers 1 Following Live DMB Setlists provided by http://t.co/X6rxlqPTNT@alexeidrummond I agree. But my tweet isn't claiming that isn't the case or even arguing against it? I do not like the with-us-or-against us thinking that pervades this entire issue. We are allowed to hold two thoughts in our head at once. It's also good to correct historical inaccuracies.
Hope to be back in the field exploring our beautiful earth and it's beautiful creatures sometime this summer!! #EarthDay
So lucky to have attended Pierre Legendre’s closing lecture at @BiologieUdeM and to have overlapped in the department with such a legend! Hope to see more of Pierre for many years to come!
I'll be defending my PhD thesis this Tuesday (April 23)! It will happen at 10 am EST and the presentation will be live-streamed here: youtube.com/channel/UC38Vx… 🦎
@phytools_liam @lukejharmon I have this for exactly one paper: my first one, published in 2000. I was so excited to receive them. Then I didn't know what to do with them :)
@BPBegha The “arc” trees are from phytools, the geological scale from strap, the assembly and circular shading was done manually in Illustrator
@phytools_liam by the way, you @phytools_liam are one of the very few people who explained the difference between joint and marginal likelihood ASR in an understandable way. I'm glad to see it repeated here. it may seem obvious, but it's worth stating this clearly
@phytools_liam aaah this is great!! i recently published my first single authored paper and it was about ancestral state reconstruction and it features #phytools and you @phytools_liam ! doi.org/10.1075/dia.22… #rstats
Ojo al parche! 👀
For people interested in such things, I just submitted a new book chapter on ancestral state reconstruction & you can check out a pre-print version here: github.com/liamrevell/Rev….
Thanks
For people interested in such things, I just submitted a new book chapter on ancestral state reconstruction & you can check out a pre-print version here: github.com/liamrevell/Rev….
@phytools_liam Yay! You read my mind! Congrats on this new chapter, and thanks for sharing. I'll be reading it asap!
Are you in Ithaca and looking for something amazing to do before the #EclipseSolar2024? Look no further! Come see Dr. Tracy Heath @trayc7 of @eeob_isu speak about her research on developing macroevolutionary models in the @CornellEEB seminar Monday (4/8) 12:20am!
Partir ramas largas de una filogenia usando R y #phytools gracias Liam
A simple (too simple?) method of creating a split x-axis graphed phylogeny using #Rstats #phytools: blog.phytools.org/2024/04/a-simp…
@phytools_liam Will be useful ! Thank you !
@phytools_liam Excellent! I’ve always wanted to do this.
Giving up on all of my other R package maintenance activities to concentrate on this new project ... github.com/bbolker/gLLMgl…
Thank you for this new function, @phytools_liam! Amazing! #phytools #paleontology
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