John Walshaw @seqwave
Bioinformatics, microbes, microbiomes - mostly. Agri-food/environment sector. United Kingdom Joined December 2017-
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John Walshaw retweeted
Just published: Microbial hitchhikers harbouring antimicrobial-resistance genes in the riverine plastisphere microbiomejournal.biomedcentral.com/articles/10.11… View the video summary for this paper: youtube.com/watch?v=syTEDt… @JCO_lab @ElizabethWelli1 @VinkoZadjelovic @RobynJWright
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John Walshaw retweeted
TaxaNorm: a novel taxa-specific normalization approach for microbiome data dlvr.it/SyJPBD
John Walshaw retweeted
(1/2) Have you seen Caro Arevalo’s incredible work? "The Fungi Painting" takes you on a journey through phyla, subdivisions, and microscopic wonders of the Fungi Kingdom.
John Walshaw retweeted
Pepper X: Eating world's hottest pepper was euphoric, says creator bbc.in/3FrYvEZ
John Walshaw retweeted
#QIIME2 2023.9 is now available! 🎊 Exciting updates include an alpha release of our shotgun #metagenomics distribution (🎉🎉🎉), fully integrated provenance replay within the framework, batched decontam analysis, and more! Thank you contributors!! 🙌 forum.qiime2.org/t/qiime-2-2023…
John Walshaw retweeted
A cat co-authored a scientific paper in 1975, when his owner, a physicist named Jack H. Hetherington, decided to add him as a second author to avoid changing the plural pronouns in his manuscript. The cat’s name was Chester, and he was given the pen name F.D.C. Willard, which…
John Walshaw retweeted
The recent discovery of extra-erythrocytic expression of haemoglobin is what I'd consider a breakthrough finding (considering it is a true finding) as it rewrites our understanding of the fundamental biology of haemoglobin. But you might be surprised to learn that there was zero…
The recent discovery of extra-erythrocytic expression of haemoglobin is what I'd consider a breakthrough finding (considering it is a true finding) as it rewrites our understanding of the fundamental biology of haemoglobin. But you might be surprised to learn that there was zero…
John Walshaw retweeted
Makefiles is peak build tooling. Imagine opening literally **ANY** project, and all you need to know is: 🔨 make build ✅ make test 🚀 make run That’s it. No need to learn a new build tool. No need to install it. No need to care about its specifics. No need to remember all…
John Walshaw retweeted
Scientists- please read this. Recently I had a reviewer question why we even solved the crystal structure if #Alphafold could predict it. This editorial summaries a lot of what I said in response and needs to be talked about more! #structuralbiology journals.iucr.org/d/issues/2023/…
John Walshaw retweeted
Small populations of Ips typographus have recently been detected in southern England for the first time, ☠️🌲 posing a new threat to UK spruce forests. Tree health monitoring can be reported through our online #TreeAlert resource: ow.ly/XYLg50PTWNz #BarkBeetle
John Walshaw retweeted
Proteins are typically expected to have one biologically relevant fold. Our latest work published in @NatureComms shows that evolution selects for proteins with two folds: nature.com/articles/s4146…
John Walshaw retweeted
VIRify: Computational pipeline for accurately characterizing viral communities, capable of identifying and classifying both prokaryotic and eukaryotic viruses. [co-authored by EVBC members M. Marz @JenaRNA, @martinhoelzer] #annotation #taxonomy doi.org/10.1371/journa…
John Walshaw retweeted
Long-read assembled metagenomic approaches improve our understanding on metabolic potentials of microbial community in mangrove sediments dlvr.it/Sv4Fbx
John Walshaw retweeted
Trade of plants in Internet increase the risk of introduction of alien plant pests based on a research of @FeraScience and other British Institutionspresented at the poster session #IPCC2023 by Morgan Wodring
John Walshaw retweeted
Time to dust off this photo (from Lon'17). Smile 😊
John Walshaw retweeted
High-resolution strain-level microbiome composition analysis from short reads dlvr.it/Stnhrq
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