Bento Lab 🧬 @theBentoLab
We make Bento Lab = a portable PCR workstation for scientists to work in remote places. Tweets about frugal methods, field sequencing and DNA barcoding bento.bio London Joined October 2013-
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Here’s a free downloadable costing & budgeting spreadsheet tool to help you fully cost your PCR lab work; calculate what you need to buy (and how much); or to help you plan what to take on fieldwork. Great for PCR beginners, and hopefully useful for the more experienced too! 👇…
Rio Negro🌎🇧🇷 final episode @AgenciaFAPESP Closing 🐡 🐠 🐟 sampling gaps 🧬 feeding phylogenomic & biogeographic studies 🧬 🗺️ Embracing innovative technology 🧬 @theBentoLab accelerating 🐟🐡species identification & discovery @NMNH youtu.be/Ov2Fwouez08?si… via @YouTube
Fantastic talk by Rosemary Gillespie @Berkeley_Evolab about viewing #biodiversity as a “fabric”, older island ecosystems being more resilient than newer & a shoutout to @theBentoLab & @nanopore for enabling local communities to engage in #research & #conservation. 🧬🌱 #UKDNAWG24
Brian Douglas @theBentoLab directed me to a neat NEB page for master mixes and optimizing annealing temperatures for PCR primers -- a NEB Tm Calculator tmcalculator.neb.com/#!/main
Here’s a new approach for DNA metabarcoding microscopic protist phytoplankton, the “building blocks of aquatic food webs”, using full-length 18S DNA metabarcoding via @nanopore sequencing; a new primer pair; and a comparison with Illumina metabarcoding to validate the results 👇…
Here’s a very interesting article in which sub-millimolar concentrations of copper ions were found to reduce non-specific PCR amplification in PCR and qPCR, leading the authors to suggest that copper salts might be suitable as economical PCR enhancers for biomedical research. 👇…
For anyone interested in communities of cryptograms (e.g. of lichens, non-lichenised fungi, bryophytes, microalgae, biocrusts, or biofilms), here's a great direct PCR DNA barcoding approach that allows the simultaneous processing of 4 different taxonomic groups in ~1 hr 6 mins!…
For anyone working with animal dung and DNA, here's a new study that found storage in Longmire’s Lysis Buffer was superior to ethanol for @nanopore MinION metabarcoding, for diverse animals such as cows, bears, tapirs, and monkeys, for up to 20 days at room-temperature and 461…
For anyone learning or teaching pipetting, here are four great exercises for accurate pipetting and dilution skills, including one with a glucose monitor (very cool!), a simple dye-based exercise, pipetting incorrectly on purpose, and a friendly classroom “Pipetting Olympics”!…
Great to see @peter_a_larsen and colleagues enjoying the pleasures of backyard PCR with their Bento Lab!
Great to see @peter_a_larsen and colleagues enjoying the pleasures of backyard PCR with their Bento Lab!
🧬 Inspiring genetics & electrophoresis workshop by @RachelleIrwin15 using @theBentoLab with year 14 #Biology pupils @DalriadaSchool. For further information on our UG courses see: ulster.ac.uk/courses/202425… ulster.ac.uk/courses/202425… @UlsterUniBiomed @StudyAtUlster
Sebastian S. Cocioba�.. @ATinyGreenCell
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Alexander Wittenberg @AW_NGS
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Workshops underway at #UKDNAWG24 We’re discussing ‘Why aren’t we using DNA more yet and what can we do about it?’ and looking at these questions
@theBentoLab Happy #DNADay!! 🤗🤩🧬🎉🥳🎉 #STEM #science #genetics
@theBentoLab #DNADay24 Happy World's DNA
Lauren Cook winning the prize for most beautiful slide illustration so far! 🧬 #UKDNAWG24
Second stage completed. 👀 🚐✅ 🛳️✅ 🚐⏳ #UKDNAWG
@AndyNisbet1 @area52lab doing a 2 hour drive from Dublin to Belfast to a 2.5 ferry and then topped off with a 5 hour drive to Inverness.
@BerndHaenfling opening the #UKDNAWG24 conference. Looking forward to 2 days of all things eDNA!
And we're off ...... #UKDNAWG24 - 2 days of eDNA knowledge exchange.
What’s in a pawprint? @MicaelaHellstr1 shows how #carnivore pawprints and snow #eDNA can provide insights on population genetics and diet for otter, lynx, snow leopard and polar bear! #UKDNAWG24
Thanks to everyone at #UKDNAWG24 for such a lovely response to my first ever talk!
And now we dive into #rewilding of terrestrial habitats with @ClareCowgill: how can #eDNA #metabarcoding help? #UKDNAWG24
Phil Davison discussing whether a +ve detection of invasive marine species by #eDNA is truly a +ve. Found ~ 10% new species for UK. Seems unlikely. Reasons inc tax reassignment, incorrect genbank entries etc. Why caution must be taken interpreting own & others results! #UKDNAWG24
Some very cool Irish #lake #sedDNA results from @Andrew_J_Tighe going back ~10,000 years 🐗🐺🦌🐂 but those pesky #otters are still eluding detection even from sediment cores! Keep an eye out for the publication 👀 #UKDNAWG24
Stunning results from the last 10K years of sedimentary lake DNA by #AndrewTighe from @area52lab #UKDNAWG24
Katie Clark from @NaturalEngland sharing the goals of creation & optimisation of airborne #eDNA samplers. Want to develop new methods to survey terrestrial biodiversity in low cost, efficient way. Need help so asking community what they need & what can they do for you #UKDNAWG24
And a final speed talk bang, with lots of #airDNA, #soil invertebrates, and new projects starting! #MarcoBenucci #KatherineLester #KatieClark #SophieseBecquevort @JELittlefair #UKDNAWG24
Katie Clark from @NEChiefSci closes Day 1 by introducing our partnership project with @JELittlefair on optimising eDNA air sampling #UKDNAWG24
Very enjoyable first day at the UK DNA working group conference in Inverness! #UKDNAWG24
So many fascinating talks kicking off the #UKDNAWG24 conference. Absolutely loving all these #DNA #eDNA #metabarcoding presentations, and great to catch up with some familiar faces🧑🔬🤩🧬
Buzzing after a great poster session. So nice to have so much interest in my project looking at #DNA #metabarcoding of #grasslands under different management regimes, some really useful discussions and great contacts made to follow up on 👍 🧬🍀🐑⛰️ #UKDNAWG24
Rio Negro🌎🇧🇷 final episode @AgenciaFAPESP Closing 🐡 🐠 🐟 sampling gaps 🧬 feeding phylogenomic & biogeographic studies 🧬 🗺️ Embracing innovative technology 🧬 @theBentoLab accelerating 🐟🐡species identification & discovery @NMNH youtu.be/Ov2Fwouez08?si… via @YouTube
Not the reason for de-listing that anyone wants to hear. The world urgently needs new tools and resources to protect our planet’s biodiversity. fws.gov/press-release/…
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