GenSpectrum @GenSpectrum
We develop open web APIs and dashboards for genomic epidemiology. Monkeypox - https://t.co/ehHkFkSaKl and SARS-CoV-2 - https://t.co/feDGaT1cNx genspectrum.org D-BSSE@ETH, Basel, Switzerland Joined October 2021-
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We have just received an updated dataset from GISAID. Many thanks to the GISAID team for fixing the data feed!
We have just received an updated dataset from GISAID. Many thanks to the GISAID team for fixing the data feed!
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Information for CoV-Spectrum users: The GISAID data on CoV-Spectrum has not been updated since 23 December due to an interruption in the data feed. We have contacted GISAID regarding this issue and are hopeful for a resolution soon.
GenSpectrum just added a mpox dashboard using data from @pathoplexus – see genspectrum.org
GenSpectrum retweeted
It was an amazing journey for us (our research team @ETH_en with the support of contracted software developers from TNG technology) to work with colleagues across the globe from the first idea to what we now call Pathoplexus pathoplexus.org! We are very proud to 1/2
It was an amazing journey for us (our research team @ETH_en with the support of contracted software developers from TNG technology) to work with colleagues across the globe from the first idea to what we now call Pathoplexus pathoplexus.org! We are very proud to 1/2
GenSpectrum retweeted
💡 Want to learn more or get involved? Visit Pathoplexus.org, follow us here, or join the discussion on our forums (discussion.pathoplexus.org)! Together, we can create a more equitable & collaborative environment for global pathogen research! 🎉 #Pathoplexus 14/14
GenSpectrum retweeted
📢 We're excited to introduce Pathoplexus, a specialized sequence database for human viral pathogens! 🌍 🧬 Launching with 4 viruses, Pathoplexus.org combines modern open-source software with transparent governance to improve global pathogen sequence sharing. 1/14
Interested in developing dashboards and tools for public health and genomic epidemiology? We are looking for a software engineer to join our GenSpectrum team at @ETH_BSSE in Basel, 🇨🇭CH! jobs.ethz.ch/job/view/JOPG_… Please reach out if you have any questions and please share! :)
CoV-Spectrum now uses the most recent Nextclade dataset and calls BA.2.86. cov-spectrum.org/explore/World/…
GenSpectrum retweeted
You can now use a chatbot to find out latest information about SARS-CoV-2 variants arxiv.org/abs/2305.13821 cov-spectrum.org/chat @GenSpectrum in your favorite language, including Swiss German! The chat relies on the millions of available SARS-CoV-2 sequences, answering 1/2
GenSpectrum retweeted
Do you want to find out details about the circulating SARS-CoV-2 variants? Then chat to cov-spectrum.org/chat - it can provide answers to questions for which even the cov-spectrum.org dashboard has no direct information. We would be grateful if you allow the 1/2
Do you want to find out details about the circulating SARS-CoV-2 variants? Then chat to cov-spectrum.org/chat - it can provide answers to questions for which even the cov-spectrum.org dashboard has no direct information. We would be grateful if you allow the 1/2
GenSpectrum retweeted
Here it is variant chatbot! This is likely among the best possible uses for AI to manage big data at the time of a pandemic ! @EricTopol @DrEricDing @TRyanGregory @RobiVil @PeacockFlu
Here it is variant chatbot! This is likely among the best possible uses for AI to manage big data at the time of a pandemic ! @EricTopol @DrEricDing @TRyanGregory @RobiVil @PeacockFlu
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