Simon Mathis @SimMat20
PhD @Cambridge_Uni | AI in protein design & engineering | biotech & environmental applications | enzymes | geometric DL | prev. @ETH_physics simonmathis.org Cambridge, UK Joined April 2020-
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Thrilled to announce I'm starting as a Principal Investigator at #Aithyra in Vienna! We'll be developing generative models to understand cell biology and design proteins. I'm hiring PhDs, Postdocs, & Visiting Researchers! PhD applications by Sept 10: apply.cemm.at
Check out our new perspective "Illuminating the universe of enzyme catalysis in the era of artificial intelligence" now out in @CellSystemsCP ! We discuss a vision and path forward for genetically encoding almost all chemistry, powered by new AI tools: authors.elsevier.com/c/1lg4h8YyDfuZ…
Where are all the de novo designed therapeutics? In a guest post by @frdreyer, we break down what the actual bottlenecks, challenges, and opportunities are in building and deploying purely in silico drug discovery engines, with a focus on antibody structure. Link below 👇
Great to finally have this available for people 🙌 Thank you to everyone involved, especially @nscorley & @r_krishna3! We'll be pushing a few smaller updates in the coming days to enhance usability for everyone (including some docs on what you can do with it) - so stay tuned (:
Great to finally have this available for people 🙌 Thank you to everyone involved, especially @nscorley & @r_krishna3! We'll be pushing a few smaller updates in the coming days to enhance usability for everyone (including some docs on what you can do with it) - so stay tuned (:
Today, we're releasing a software suite to train biomolecular neural networks called AtomWorks. We have already used it to train performant networks in our group -- we hope that others find it as useful as we do! Check it out at github.com/RosettaCommons…
Today, we're releasing a software suite to train biomolecular neural networks called AtomWorks. We have already used it to train performant networks in our group -- we hope that others find it as useful as we do! Check it out at github.com/RosettaCommons…
Atomsworks and RF3 is finally here!! I was very fortunate to get early access to atomworks and it really lowers the activation energy todo some really cool stuff with the PDB very quickly. Might share fun examples later Huge congrats to @SimMat20 and team!!! ✨
RosettaFold 3 is here! 🧬🚀 AtomWorks (the foundational data pipeline powering it) is perhaps the really most exciting part of this release! Congratulations @SimMat20 and team!!! ❤️
RNA-FrameFlow has found a new home in TMLR @TmlrPub 🥳 Over the past one year, we've spent quite some time making our method faster, developing more intricate evaluation pipelines, thinking about conditional design, and assessing/ablating our modeling choices Here are some…
RNA-FrameFlow has found a new home in TMLR @TmlrPub 🥳 Over the past one year, we've spent quite some time making our method faster, developing more intricate evaluation pipelines, thinking about conditional design, and assessing/ablating our modeling choices Here are some…
Introducing Latent-X — our all-atom frontier AI model for protein binder design. State-of-the-art lab performance, widely accessible via the Latent Labs Platform. Free tier: platform.latentlabs.com Blog: latentlabs.com/latent-x/ Technical report: tinyurl.com/latent-X
Check out La-Proteina, our new model for all-atom structure generation at scale! Was a very fun project to work on with @tomasgeffner and the rest of the team. Two things I am particularly excited about in 🧵 1/n
Check out La-Proteina, our new model for all-atom structure generation at scale! Was a very fun project to work on with @tomasgeffner and the rest of the team. Two things I am particularly excited about in 🧵 1/n
Many top academic AI researchers are GPU poor. The Sovereign AI Unit wants to change this story. We are seeking ambitious AI research proposals for UK academics aiming to take their research to the next level. Read below to find out more and apply 🧵👇
Exciting! 🙌
Sharing a surprising result on AI molecule generation with Transformers: All-atom DiT with minimal molecular inductive bias is on par with SOTA equivariant diffusion (SemlaFlow, a very strong and optimized model) Scaling pure Transformers can alleviate explicit bond prediction!
Following our successful SF event, we (compmotifs.com) are running another hackathon! When? 7-8 June Where? London Who? Builders & researchers from academia & industry What? Develop computational tools to advance the natural sciences Join us: lu.ma/apsqlxlj?utm_s….
Equivariance is dead - long live equivariance? Scaling pure Transformers is the future of molecular generative models? I think its a lot more nuanced -- I tried to give some perspectives in my spotlight talk at #ICLR2025 AI4Mat Workshop last week
RFdiffusion2 generates new enzyme structures just from the most basic descriptions of their geometry. See @woodyahern's thread to see the next generation of de novo enzyme design:
RFdiffusion2 generates new enzyme structures just from the most basic descriptions of their geometry. See @woodyahern's thread to see the next generation of de novo enzyme design:
Highly recommend a read - @woodyahern is one of the most competent people I had the pleasure to work with, he’s expertise not only in machine learning but also protein design and biochemistry - amazing work, Woody + team!
Highly recommend a read - @woodyahern is one of the most competent people I had the pleasure to work with, he’s expertise not only in machine learning but also protein design and biochemistry - amazing work, Woody + team!
Very Exciting -- Congratulations!
Our first attempts at mechanistic interpretability of Transformers from the perspective of network science and graph theory! A wonderful collaboration with superstars @elb4tu, Deepro Choudhury, @pl219_Cambridge as part of the Geometric Deep Learning class at @Cambridge_CL!

Kevin K. Yang 楊凱�... @KevinKaichuang
21K Followers 6K Following Principal Researcher in BioML @MSFTResearch (@MSRNE). He/him/他. 🇹🇼
Learning on Graphs Co... @LogConference
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Michael Bronstein @mmbronstein
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Fabrizio Frasca @ffabffrasca
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Gabriele Corso @GabriCorso
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Cristian Bodnar @crisbodnar
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Hannes Stärk @HannesStaerk
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Emanuele Rossi @emaros96
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Michael Galkin @michael_galkin
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Yuanqi Du @YuanqiD
4K Followers 786 Following Intern @Nvidia; Passionate researcher and community builder @AI_for_Science @LogConference; CS PhD @Cornell; Prev @AmlabUva, @MSFTResearch, @MSRNE
Chaitanya K. Joshi @chaitjo
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Stephen Ra @stephenrra
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Machine Learning: Sci... @MLSTjournal
10K Followers 10K Following A multidisciplinary, #openaccess journal devoted to the application and development of #machinelearning for the sciences. Published by @IOPPublishing.
Sergey Ovchinnikov @sokrypton
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Charlie Harris @charlieharris01
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Machine learning for ... @ml4proteins
8K Followers 124 Following Seminar series on machine learning for protein engineering. Details for seminars and slack are on our website. DM us if you're interested in presenting!
Taco Cohen @TacoCohen
27K Followers 3K Following Post-trainologer at FAIR. Into codegen, RL, equivariance, generative models. Spent time at Qualcomm, Scyfer (acquired), UvA, Deepmind, OpenAI.
Tian Xie @xie_tian
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Symmetry and Geometry... @neur_reps
5K Followers 1K Following NeurIPS workshop and digital community | 🌐 geometry, algebra, topology + 🤖 deep learning + 🧠 neuroscience | Join us on slack! https://t.co/Run9wPnrDB
MaureenBryan @qNOVHs46F5j33
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Richard G. Lanzara, M... @rlanzara
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Nayim GR @Nayimcete
856 Followers 2K Following All things bio, but all things cryo ❄️🔬 | BIF PhD Fellow at @LlorcaLab
GAMA Miguel Angel �... @miangoar
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Anjali Mishra @anjali461721
90 Followers 4K Following @Biochemistry Undergraduate student at @Indira Gandhi National Open University
Nate Corley @nscorley
22 Followers 14 Following PhD Candidate @ the University of Washington's Institute for Protein Design | Baker Lab | Machine Learning for Protein Design | Enzymes
manvir clair @gyro_practor
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Gemma @44FhQc471XBR3z
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Mark Neumann @MarkNeumannnn
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Amit Roy @AmitRoy7781
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Chence Shi @chence_shi
205 Followers 435 Following CS PhD @Mila_Quebec undergraduate student @PKU1898
120l3327 @120l3327
12 Followers 4K Following
Jinwoo Leem @ideasbyjin
1K Followers 622 Following ML research @IsomorphicLabs prev: @alchemabtx, @benevolent_ai, @OPIGlets. Antibodies, LLMs, structure prediction. 🇨🇦🇬🇧🇰🇷 Tweets=my views.
Peter Wang @wyppeter
322 Followers 415 Following PhD candidate, Bartel Lab, MIT/@WhiteheadInst. Biochemical + biophysical principles of protein/RNA mechanisms. MicroRNA/siRNAs & AGO proteins.
Gabe Gomes @gabepgomes
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Michaela Brezinova @michbrezinova
58 Followers 269 Following PhD @Cambridge_Uni, prev SWE @GoogleHealth. AI for Drug Discovery. Opinions expressed are my own.
James Michael Krieger @james_krieger
1K Followers 4K Following PhD & postdoc w @IGreger1 @MRC_LMB & @IvetBahar (ProDy) @CompBioPitt. @CSIC-@MSCActions fellow w @JM_Carazo & @COSSStock @CNB_CSIC. #Proteindynamics & #CryoEM
Sam Tipps @SamTipps
666 Followers 265 Following Computational vaccine design @UWproteindesign | @KingLabIPD
keshav Kant @keshavvkant
345 Followers 5K Following A fractal mind, trying to find self similarities in the world. MSc biology'24 @AshokaUniv
conan kinde @ConanKinde
0 Followers 4K Following
Ryan Bailey @BioExplorr
192 Followers 933 Following Protein Design & Engineering, Vaccinology & Immunology. PhD student in the lab of Dr. Iain MacPherson at the University of Hawaii.
Saman Salike @samansalike31
32 Followers 272 Following intellectual flaneur, lover of (designed) proteins
Henry Kenlay @hennesseeeeee
435 Followers 2K Following MTS @Latent_Labs. Previously @ExscientiaAi, @UniofOxford (@aims_oxford), @Cambridge_Uni. Machine Learning ∩ Biology 🤖🧬
Daniel of the Shire @countrsignal
753 Followers 5K Following machine learning 🤖 ∪ biotech 🧬 ∪ chickens 🐣
Artem Moskalev 🕊�... @artemmoskalev
1K Followers 971 Following Re-imagining drug discovery with AI 🧬. Deep Learning ⚭ Geometry. Previously PhD at the University of Amsterdam. 🦋 artemmoskalev
Jarrid Rector-Brooks @jarridrb
191 Followers 203 Following PhD student @Mila_Quebec with Yoshua Bengio, currently visiting @Caltech supervised by Frances Arnold
Sebastian Velandia-Á... @sebasveal
1K Followers 4K Following Microbiologist 🔬🧪| 🦠🧬 PhD student in the @RonGellerLab at @i2sysbio. Viruses, evolution and cool stuff. 🇨🇴🇪🇸
Arti Intel 𝕏 @IntelArtii
146 Followers 1K Following AI engineer and Pharmacist. Focusing on Drug Discovery with AI
Alex Abrudan @Alex__Abrudan
80 Followers 135 Following PhD student interested in AI in Protein Design. My research is focused on multi-state proteins and intrinsically disordered protein systems.
Martin Pacesa @MartinPacesa
5K Followers 988 Following Structural biologist working on 🖥️ protein design, AI, and #CRISPR-Cas gene editing ✂️🧬 Avid weirdness connoisseur 🎩
Gautam @gautammalik_x
23 Followers 126 Following Passionate about integrating computational science & AI/ML in drug discovery.🌐🧬🔬| MSc @iiscbangalore
Lucia Urcelay @luciaurcelayg
75 Followers 422 Following ml research scientist @ferruz_noelia lab @crgenomica | protein design | prev @novartis @bsc_cns
Rut christine @ChristineR2303
6 Followers 229 Following
Linna An @alchemist_an
764 Followers 471 Following TTAP @RiceUniversity | computational biochemist | Protein designer @UWproteindesign & natural product biochemist @ChemistryUIUC | open to industry
Petar Veličković @PetarV_93
41K Followers 555 Following Senior Staff Research Scientist @GoogleDeepMind | Affiliated Lecturer @Cambridge_Uni | Assoc @clarehall_cam | GDL Scholar @ELLISforEurope. Monoids. 🇷🇸🇲🇪🇧🇦
Kevin K. Yang 楊凱�... @KevinKaichuang
21K Followers 6K Following Principal Researcher in BioML @MSFTResearch (@MSRNE). He/him/他. 🇹🇼
Learning on Graphs Co... @LogConference
10K Followers 774 Following LoG is a new annual research conference that covers areas broadly related to machine learning on graphs and geometry, with a special focus on review quality.
Michael Bronstein @mmbronstein
53K Followers 6K Following #DeepMind Professor of #AI @UniofOxford / Director #AITHYRA / Chief Scientist @vant_ai / https://t.co/kZpGpDzYeV (opinions are mine) 🤖🧪🧬🎶🐎
Fabrizio Frasca @ffabffrasca
2K Followers 564 Following Postdoctoral Fellow @TechnionLive — Geometric Deep Learning in some of its various forms — PhD @imperialcollege — Previously @twitter, @fabula_ai and @polimi
Gabriele Corso @GabriCorso
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Cristian Bodnar @crisbodnar
6K Followers 2K Following Co-founder @SilurianAI. Training big neural nets to simulate the world. Previously @MSFTResearch, @Google Brain, @Theteamatx | ML PhD from @Cambridge_Uni
Andrew White 🐦�... @andrewwhite01
27K Followers 2K Following Head of Sci/cofounder @FutureHouseSF. Prof of chem eng @UofR (on sabbatical). Automating science with AI and robots in biology. Corvid enthusiast
Frank Noe @FrankNoeBerlin
12K Followers 547 Following Scientist, #MachineLearning and #AI for the Sciences (esp. Physics/Chemistry). Scuba Diver and Traveler.
Hannes Stärk @HannesStaerk
12K Followers 407 Following @MIT PhD student • ML for molecules and biology https://t.co/hEtGZrEHqu
Emanuele Rossi @emaros96
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Daniele Grattarola @riceasphait
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Simon Batzner @simonbatzner
5K Followers 2K Following RS at GDM, interested in RL, physics, chess. prev: Google Brain
Michael Galkin @michael_galkin
7K Followers 330 Following Senior Research Scientist @GoogleAI. Prev: @Intel, Postdoc @Mila_Quebec & McGill. Graph Learning & LLMs. Grandmaster of 80's music (according to Spotify)
Yuanqi Du @YuanqiD
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Chaitanya K. Joshi @chaitjo
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Valence Labs @valence_ai
6K Followers 30 Following Decoding biology to radically improve lives. Powered by @recursionpharma
Stephen Ra @stephenrra
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yobibyte @y0b1byte
23K Followers 2K Following ViTaly, yobibyte, senior RS @ NVIDIA, Reinforcement Learning PhD from @UniofOxford, ex RS at Isomorphic Labs, intern @ MSR Cambridge, DeepMind, Facebook, NVIDIA
Stephan Günnemann @guennemann
4K Followers 90 Following Professor for Data Analytics and Machine Learning @ TU Munich
Noah Smith 🐇 @Noahpinion
359K Followers 2K Following Writes about economics, posts about rabbits. For serious opinions/analysis, read my blog: https://t.co/KfUxUlCYPz
Lucas Beyer (bl16) @giffmana
108K Followers 519 Following Researcher (now: Meta. ex: OpenAI, DeepMind, Brain, RWTH Aachen), Gamer, Hacker, Belgian. Anon feedback: https://t.co/xe2XUqkKit ✗DMs → email
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111 Followers 50 Following
Fay Lin, PhD @xiaofei_lin
16K Followers 1K Following Senior Technology Editor @GENBio ▪ DM me about all things AI x Bio 🧬🧪 ▪ ✉️ [email protected] ▪ she/her
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Jeffrey Ouyang-Zhang @zhang_ouyang
149 Followers 265 Following PhD Student at UT Austin ML+Bio (prev CV)
NewLimit @newlimit
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Jacob Kimmel @jacobkimmel
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Nicolas Perez-Nieves @NicolasPerezNi1
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Henry Kenlay @hennesseeeeee
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Michaela Brezinova @michbrezinova
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Protenix @ai4s_protenix
525 Followers 64 Following Protein + X molecules. Discover the mysteries of life with AI.
Philipp Seidl @phseidl
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Niko McCarty. @NikoMcCarty
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Sebastian Pujalte @rumbacarumba
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KnowlesLab Cambridge @KnowlesLabCamb
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Sebastian Raschka @rasbt
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Russ Wilcox @Russ_Wilcox
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Jonathan Crabbé @JonathanICrabbe
233 Followers 230 Following 🧬MTS @ Latent Labs 🎓PhD in ML @ University of Cambridge ⚙️ Ex-RS Intern @ Apple MLR & Microsoft Research 💡GenAI for Biology & Protein Design
Bo Wang @BoWang87
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Keyon Vafa @keyonV
5K Followers 826 Following Postdoctoral fellow at @Harvard_Data | Former computer science PhD with @Blei_Lab at @Columbia University | Researching AI + world models
Daniella Pretorius @daniellapret
230 Followers 243 Following 🇿🇦 | PhD Candidate at @imperialcollege in the @jwm_imperial lab | 🔬 Protein Design | 🧬 Biochemistry | 🤖 Explainable AI | 🌐
Tomas Geffner @tomasgeffner
289 Followers 1K Following (ex) tennis, (trying) ML. Research Scientist at NVIDIA, views are my own. Previously, intern at DeepMind, VantAI, Microsoft research, and Amazon AWS.
Alex Chalmers @chalmermagne
3K Followers 837 Following I am cringe but I am free | AI and energy @WorksInProgMag | Emergent Ventures ❤️🔥
EvE Bio @EvEBiotech
531 Followers 244 Following Durham NC nonprofit biotechnology start-up working to map the pharmome. Nurtured by @Convergent_FROs, supported by generous philanthropists.
Marinka Zitnik @marinkazitnik
8K Followers 226 Following Associate Professor at Harvard | Faculty @Harvard @KempnerInst AI | Faculty @broadinstitute @harvard_data | @ProjectTDC @AI_for_Science
Alex Zhavoronkov, PhD... @biogerontology
32K Followers 2K Following My posts are strictly personal, not reflective of positions or policies of Insilico Medicine, which disclaims any responsibility for my individual statements.
Zavain Dar @zavaindar
12K Followers 3K Following Batman; Investor X Computer Scientist. Founder @_DimensionCap
Yisong Yue @yisongyue
22K Followers 3K Following Machine Learning @Caltech (@YueLabCaltech). AI for invention at @AsariAILabs.
Alex Tong @AlexanderTong7
3K Followers 547 Following PI at Aithyra making models for cells and proteins.
Sophia Tang @_sophia_tang_
202 Followers 108 Following AI for bio at https://t.co/K2Q9Ang5qu / drug delivery at https://t.co/3ts9pXnAsL / writing at https://t.co/Z3ZLVrZeI6 / cs at upenn m&t
Joey Bose @bose_joey
3K Followers 276 Following Incoming Assistant Professor @imperialcollege and @Mila_Quebec Affiliate member. Into Geometry ∩ Generative Models and AI4Science. Ex-@Mila_Quebec, @UofT.
NOETIK @NOETIK_ai
1K Followers 47 Following Noetik is an AI-native biotech harnessing self-supervised learning to discover better precision immunotherapies.
Jakub Lála 🦸�... @jakublala
540 Followers 670 Following science, music, startups, philosophy, love, curiosity | previously @TheCrick @ICSoftNano @lab_COSMO @RGBLabMIT @FutureHouseSF
Leonardo V. Castorina @DrLeucine
989 Followers 505 Following Senior Protein Dreamer @AstraZeneca 🎓 PhD: @BioMedAI_CDT. 📝 Blog: https://t.co/9eaGJFHhQP 💼 Prev: @MSFTResearch, @NEC
Kyle Tretina, Ph.D. @AllThingsApx
4K Followers 461 Following Follow for AI in Digital Biology and Drug Discovery @NVIDIA, ex Insilico Medicine, ex Yale, PhD UMaryland, views are mine, DM for collabs
Diffuse Bio @diffuse_bio
534 Followers 2 Following We build AI models to design any protein, for any purpose.
John Jumper @JohnJumperSci
1K Followers 0 Following