CompuCell3D @compucell3d

Free multi-scale cell & tissue modeling platform | Making mechanistic modeling & simulation accessible to all | PI: @JamesAGlazier1 compucell3d.org Indiana University Bloomington Joined May 2018

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CompuCell3D @compucell3d

4 weeks ago

Join us at 03:00 PM today for Pedro dal Castel's talk on AI model surrogates and configuring CompuCell3D Simulations for execution on high-performance clusters. Register & Join: tinyurl.com/CC3DDevDay2025

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CompuCell3D @compucell3d

a month ago

Join us tomorrow, Aug. 7, for our CompuCell3D Developer Tools Day! We will be teaching how to compile CC3D in C++ for writing extensions to the codebase, plus how to configure CC3D simulations for execution on high-performance clusters. Register here: tinyurl.com/CC3DDevDay2025

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CompuCell3D @compucell3d

3 months ago

DEADLINE EXTENDED: Apply now for the 2025 CompuCell3D Virtual Tissue Modeling Workshop and Hackathon! Learn to model multicellular systems in CompuCell3D. All skill levels are welcome. More information: compucell3d.org/Workshop25 Apply by June 15th: tinyurl.com/CC3D2025

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CompuCell3D @compucell3d

6 months ago

We are pleased to announce the 2025 CompuCell3D Virtual Tissue Modeling Workshop and Hackathon! Learn to model multicellular systems in CompuCell3D. All skill levels are welcome. We hope to see you there! More information: compucell3d.org/Workshop25 Register: tinyurl.com/CC3D2025

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CompuCell3D @compucell3d

10 months ago

Join us tomorrow, Nov 1st at 2:00 PM EDT for an IU Intelligent Systems Engineering Colloquium Series presentation from Dr. Thomas Knudsen. "Predictive Modeling: encoding the developing embryo." Luddy Hall, Rm 4063. Virtual attendees can join by Zoom: iu.zoom.us/j/89057921641

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CompuCell3D @compucell3d

a year ago

Join us today, August 2nd, for our second round of guest presentations for the 2024 CompuCell3D Modeling Workshop. Talks will take place concurrently from 2:45–4:15 PM EDT (Zoom links below). Sessions will be available on YouTube following the workshop. We hope to see you there!

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CompuCell3D @compucell3d

a year ago

UPDATE: We have added a fourth talk to our guest presenter schedule during today's workshop. Please join us today, August 1st, at 2:45 PM EDT for one of our parallel session speakers! Recordings of each session will be available on YouTube after the talks.

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CompuCell3D @compucell3d

a year ago

Join us tomorrow, August 1st, for several guest presentations hosted by the 2024 CompuCell3D Modeling Workshop. Talks will take place concurrently from 2:45–4:15 PM EDT (Zoom links below). All sessions will be available on YouTube following the workshop. We hope to see you there!

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CompuCell3D @compucell3d

a year ago

One final extension of the CC3D Virtual Tissue Modeling Summer Workshop registration deadline! Get your applications in by July 5th if you'd like to come learn multicellular modeling with CompuCell3D. More information: compucell3d.org/Workshop24 Register: tinyurl.com/CC3D2024

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CompuCell3D @compucell3d

a year ago

Registration for the 2024 CompuCell3D Summer Workshop and hackathon has been extended to June 17th! Learn to build multicellular virtual tissue models in CC3D. No experience necessary! Info: compucell3d.org/Workshop24 Apply: tinyurl.com/CC3D2024

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CompuCell3D @compucell3d

a year ago

REMINDER: Registration for the 2024 CompuCell3D Virtual Tissue Modeling Workshop is now open! Learn to create multicellular simulations in CompuCell3D. No experience required; all backgrounds welcome. More information: compucell3d.org/Workshop24 Register : tinyurl.com/CC3D2024

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CompuCell3D @compucell3d

a year ago

We are pleased to announce the 2024 Virtual Tissue Modeling Summer Workshop and Hackathon! Learn to model your system of interest in CompuCell3D. All skill levels are welcome. We hope to see you there! More information: compucell3d.org/Workshop24 Register: tinyurl.com/CC3D2024

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CompuCell3D @compucell3d

2 years ago

Dr. Juliano Ferrari-Gianlupi also gave a talk at COMBINE on his work on cross-platform model validation, including tools/approaches for building translators that convert specification across different platforms while maintaining the underlying biology. youtu.be/G2F2MuY3ifA?si…

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CompuCell3D @compucell3d

2 years ago

Dr. Glazier's talk on Virtual Tissue model sharing at the COMBINE meeting today. Identifies and discusses key challenges in sharable model specification, as well as opportunities for advancement in creating more sharable/accessible model spec standards. youtu.be/HAo7vKwZnDo?si…

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CompuCell3D @compucell3d

2 years ago

If you didn't have a chance to attend our CompuCell3D Training Workshop last month, recordings of all the sessions are available online! You can now attend at your own place with our 2023 Workshop playlist: youtube.com/playlist?list=…

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CompuCell3D @compucell3d

2 years ago

Join us today at 2:45 PM (EDT) for a CC3D Workshop Guest Presentation from Dr. Shane Hutson of Vanderbuilt University. Dr. Hutson will be presenting on their CompuCell3D model of secondary Palate Fusion and Disruption. iu.zoom.us/j/87335828295

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CompuCell3D @compucell3d

2 years ago

We just started off Day 3 of our advanced week of this year's workshop! Today's lectures cover vector fields and more on cell links in CompuCell3D. If you are not registered, you can still watch the workshop from our Youtube livestreams: youtube.com/@jamesglazier6…

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CompuCell3D @compucell3d

2 years ago

We just started off Day 2 of our advanced week of this year's workshop! Today's lectures cover compartmental cells, links, and aggregate behaviors. If you are not registered, you can still watch the workshop from our Youtube livestreams: youtube.com/@jamesglazier6…

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CompuCell3D @compucell3d

2 years ago

Advanced week of 2023 CompuCell3D Workshop is about to start! Today's lectures cover Network Modeling with CompuCell3D with Prof. James Glazier, starting at 10am EST. If you are not registered, you can still watch the workshop from Youtube: youtube.com/@jamesglazier6…

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CompuCell3D @compucell3d

2 years ago

The registration deadline for the 2023 CC3D Summer Workshop has been extended to June 15th! Learn to model your biological system of interest in CompuCell3D. No experience necessary. Register: tinyurl.com/CC3D2023 More information: compucell3d.org/Workshop23