mutational signatures twitbot @mutSignatures
Twitterbot for tweets and #PubMed articles with keywords of mutational signatures and hashtags #MutationalSignature. Updated daily. Curated by @zhiiiyang. Joined November 2019-
Tweets3K
-
Followers251
-
Following6
-
Likes1
Assigning mutational signatures to individual samples and individual somatic mutations with SigProfilerAssignment biorxiv.org/cgi/content/sh… #bioRxiv
Assigning mutational signatures to individual samples and individual somatic mutations with SigProfilerAssignment biorxiv.org/cgi/content/sh… #biorxiv_bioinfo
Mutational Signatures: Affinity-enhanced RNA-binding domains as tools to understand RNA recognition dlvr.it/Ss1ZPZ
@stevenemassey @EmaNymton90 @CD57227 @FloDebarre @edwardcholmes @KatherineJWu @flor8i @natashaloder @PeaseRoland @ReskiLab You can get clues to how long DNA has been exposed to the environment due to cytosine deamination or 8-oxoG. I’m not sure how quantitative it would be, especially knowing they bleached the place. Would just be interesting to look at the raw read low level mutational signatures.
Mutational Signatures: Construction and validation of a cuproptosis-related five-lncRNA signature for predicting prognosis, immune response and drug sensitivity in breast cancer dlvr.it/SrykhX
Mutational Signatures: Outlier expression of isoforms by targeted or total RNA sequencing identifies clinically significant genomic variants in hematolymphoid tumors dlvr.it/Srxq9h
Mutational Signatures: SARS-CoV-2 Nsp1 mediated mRNA degradation requires mRNA interaction with the ribosome dlvr.it/SryGRf
Mutational Signatures: New insights into the pathogenicity of TMEM165 variants using structural modeling based on AlphaFold 2 predictions dlvr.it/SrxNx1
Mutational Signatures: Implications of inflammatory cell death-related IFNG and co-expressed RNAs (AC006369.1 and CCR7) in breast carcinoma prognosis, and anti-tumor immunity dlvr.it/SrsXpY
#WCGIC2023 I Highlight on colorectal cancer with Dr. @TimonV 📍 Use of ctDNA as a tool for guiding treatment decisions 📍 Mutational signatures and the role of Homologous Recombination Deficiency alterations 📺 Watch the video ➡️bit.ly/46FQLLP
Mutational Signatures: The dysferlin C2A domain binds PI(4,5)P2 and penetrates membranes dlvr.it/SrpptB
Mutational Signatures: Therapy-induced APOBEC3A drives evolution of persistent cancer cells dlvr.it/SrqJf1
Mutational Signatures: A novel stemness classification in acute myeloid leukemia by the stemness index and the identification of cancer stem cell-related biomarkers dlvr.it/Srqmv3
Our manuscript on reliability of panel-based mutational signatures for ICI efficacy in NSCLC is now online. @JessaZiekenhuis @JessaWetenschap @LCRCenter @longartsen @umcg @NKI_nl @LungCaJournal sciencedirect.com/science/articl…
Distinct Genomic Landscape of Lung Adenocarcinoma from Household Use of Smoky Coal.... doi.org/10.1164/rccm.2…
@SerenaNikZainal speaking on her work on maximising the value of genomic information and mutational signatures to understand cancer #milnersymp23
In this video, Dr Alison Berner speaks about the developments being made in the analysis of mutational signatures in tumour DNA and how it's leading to the use of personalised medicines. Watch it here: orlo.uk/0XnUe #ClinicalGeneticsinAction #genomics #ColorectalCancer
We analyzed MBD4 in 728 patients with CRC, polyposis, and other suggestive phenotypes. 8 CRC patients carried rare homozygous or heterozygous germline variants in MBD4, but tumor mutational signature analysis showed no MBD4 deficiency. ➡️MANS is indeed VERY RARE
Read the paper for details and check the analysis of mutational signatures (useful tips to unequivocally identify MBD4 deficiency based on MutSigs). SBS1 vs. SBS96 rdcu.be/df0nW
Mutational signatures reveal mutual exclusivity of homologous recombination and mismatch repair deficiencies in colorectal and stomach tumors pubmed.ncbi.nlm.nih.gov/37393385/
Fran Supek @FranSupek
3K Followers 3K Following 🧬Genetics geek,🤖AI enthusiast. PI @GenomeDataLab studying DNA repair, mutations, epigenome, NMD, cancer. Prof @UCPH_Research, GL @IRBBarcelona 🎲Chaotic good
Serena Nik-Zainal @SerenaNikZainal
7K Followers 626 Following Professor of Genomic Medicine | #NHS | needs regular snacks | delivers an effective roundhouse kick | Though she be but little, she is fierce
Isidro Cortes-Ciriano @isidrolauscher
2K Followers 2K Following Research Group Leader at EMBL-EBI @emblebi & Associate Faculty at @sangerinstitute. @CR_UK Career Establishment Awardee. Cancer genomics.
Dr. Bishoy M. Faltas @FaltasLab
7K Followers 8K Following Physician-Scientist. Chief Research Officer @EngIPM. Gellert-John P. Leonard Scholar, Associate Professor @WeillCornell. Husband & father. RTs ≠ endorsements
Alvin Ng @alvinwtng
594 Followers 1K Following Working in genomics & computational biology. Coffee geek. Experimentalist in the kitchen. Nocturnal baker. Views are my own.
Emre Kocakavuk, MD, P... @ekocakavuk
935 Followers 959 Following Emmy Noether Group Leader | Forbeck Scholar | Clinician Scientist in Hematology/Oncology | @UniklinikEssen & @YaleMed
Florian Markowetz @markowetzlab
4K Followers 2K Following Computational Oncology at Cambridge | chromosomal instability | genomes and images | selfish about reproducibility | useless models | all fox, no hedgehog
Nuria Lopez-Bigas @nlbigas
7K Followers 2K Following I DON'T USE TWITTER Follow me at: https://t.co/MqqQHVTPix ICREA at @irbbarcelona. Computational cancer genomics. Leading the @bbglab
Safia Danovi @SafiaDanovi
2K Followers 2K Following Unrepentant cancer research junkie. Senior Editor at Nature Genetics. Own views.
Crispin Hiley @crispinhiley
2K Followers 1K Following Lung and Metastatic Cancer Specialist. Associate Professor. Consultant Oncologist. @uclh @uclcancer @CRUKLungCentre @genesiscare
KBB @willdo8A
1 Followers 78 Following
magombe ayub @AyubMagombe
740 Followers 3K Following Business Executive| Diagnostics |Genomics Student!!
Benedikt Geiger @geiger_benedikt
5 Followers 173 Following
Evan Savage @savegry
4 Followers 35 Following
Laura Woodhouse @LC_Woodhouse
22 Followers 85 Following Medical Oncology Doc @TheChristieNHS | CRUK Clinical Research Fellow @MCRCnews @OfficialUoM | Loves a long run 🏃🏼♀️@bramhallrunners prev. @ELRunners
Ritwika Bose @RitwikaBose15
32 Followers 108 Following Graduate student @ Baylor college of medicine
Mansour Ahmed @Mansour78264692
21 Followers 397 Following
Aliah Hawari @aliah_hawari
16 Followers 166 Following computational biologist | cancer genomics data scientist | metabolic modeller | recipe-trying enthusiast
nour aid @nouraid10
969 Followers 5K Following
Tae Hee Clara Kim @ClaraTHKim
7 Followers 64 Following
Journal of Clinical &... @JCTR_ASP
597 Followers 3K Following The Journal of Clinical and Translational Research (JCTR) is an open access, peer-reviewed journal that publishes studies with clinical components.
Avraam Tapinos @AvraamTapinos
34 Followers 88 Following Computer Scienctis, computational biologist, bioinformatician (Wedge Lab). Enjoys coding, data analysis, recreational cycling and beer.
Jigs Mishra @Mishra_Jigs
19 Followers 118 Following PhD @UofT, @MoGen_Grad at @OICR_news | MS thesis at ICB, @HelmholtzMunich | MSc @LMU_Muenchen | BSc @iiscbangalore | Computational Biology
Qi Zhao @qi_likelet
138 Followers 240 Following
Kristof Cuppens @k_cupp_
510 Followers 954 Following MD MSc - Thoracic Oncology, master in hospital and health care management Hasselt - Belgium 🇧🇪 - PhD candidate Amsterdam/Leiden - he/him 🌈
Orlando Furioso @Ludovico_Ariost
147 Followers 482 Following Hoffentlich wird es nicht so schlimm, wie es bereits ist ... 😉
Dina ElHarouni @DElharouni
217 Followers 591 Following PostDoc | Clinical Decision Intelligence | Bioinformatics | Orchestrating Precision | @DanaFarber @HarvardMed @broadinstitute | #DKFZAlumnus #PhD | #Olympian 🎯
giovanni capranico @gcapranico
173 Followers 267 Following Interested in cancer genome instability, topoisomerases and non-B nucleic acid structures. Professor of Molecular biology at @UniBO.
Marc de Manuel @MarcdeManuel
479 Followers 466 Following Evolutionary biologist, interested in how mutations originate. Group leader at @IBE_Barcelona.
Majd Al Assaad, MD @MajdAssaad
242 Followers 275 Following Aspiring Pathologist @WCMCPathology 🔬 #Cancer #Genomics | Alum of AUB_Lebanon & @lebamericanun
Shu Yazaki, MD, PhD @ShuYazaki
448 Followers 502 Following Reseach fellow @MSKCancerCenter | Medical Oncologist trained at National Cancer Center🇯🇵| interested in Breast, GYN cancer, Genome biology, Tumor immunology
Natanael @N_t_n__l
266 Followers 1K Following
Thomas Bradley @TBradley27
343 Followers 1K Following Postdoctoral research associate in the Brenton group at @CRUK_CI, @Cambridge_Uni working on the computational molecular biology of ovarian cancer
Samuel Ejadi, MD @sejadiMD
277 Followers 2K Following Medical Oncologist ▪ Immunology ▪ Cancer Immunotherapy ▪ ImmunoOncology ▪ Nutrition ▪ Environment ▪ Conscience ▪
Weisi Liu @weisi_liu
83 Followers 170 Following Translational Medicine Scientist at Burning Rock. Trained in Dr. Bishoy Faltas lab at WCM.
Carlos Mendez-Dorante... @CarlosMendezPhD
755 Followers 2K Following Científico | Jane Coffin Childs Fellow | Forbeck Scholar | 🇲🇽👨🏽🔬 https://t.co/PIehdC05ci
Fang Hu @FangHu_HKU
78 Followers 218 Following Bioinformatics, Cancer genomics, Mutational signature, DNA damage and repair
Ceron Lab @CeronLab
2K Followers 1K Following Using the nematode C. elegans to investigate human diseases and enjoy science. Tweets all come from Julián Cerón, PI of the group. Also🎙 in @raticosde100cia
Tongwu Zhang @xtmgah
37 Followers 286 Following
Rosana Risques @RosanaRisques
170 Followers 404 Following Cancer genetics, precancer, somatic evolution, cancer and aging. Laboratory Medicine and Pathology, University of Washington.
Trent Gomberg @Stuck_in_Xosome
54 Followers 146 Following Gene Yeo’s group at UCSD | Nucleate San Diego | formerly Berkeley ‘19 | ScribeTx ‘21 | Neuro disease, gene therapy, viral vectors, EVs
Oncopedia @onco_pedia
1K Followers 964 Following Editor: Marcos André Costa. Oncologist, Sao Paolo🇧🇷. Tweets are my own.
Emanuele Sasso, PhD @Sasso_Emanuele
345 Followers 2K Following Vaccines, mRNA and viral vectors for cancer immunotherapy. Enthusiastic Biotechnologist Nature and Animal lover
Paul Brennan @Lyonpaul
695 Followers 397 Following interested in causes of cancer and early detection.
Lisa Casimir @CasimirLisa
89 Followers 237 Following PhD student in Biology 👩🏽🔬 Trying to understand the complexity of DNA damage and repair 🧬
saman man pradhan @samanprd
79 Followers 2K Following
Diana Ivanoiu @DianaScience
36 Followers 357 Following
ZY @ziyione
57 Followers 947 Following PhD | TCR-seq | Liquid Biopsy | Multi-cancer early detection | cfDNA/cfRNA
Andres F. Cardona @AndresFCardonaZ
9K Followers 4K Following Pursue knowledge, mentor students, collaborate globally, and push boundaries. Everything else is just noise in the academic concert.
Sigurgeir Olafsson @MutationalSig
353 Followers 264 Following A research scientist in deCODE genetics, Iceland studying somatic evolution in cancer, normal tissues and complex traits. Previously at the Sanger Institute.
Maia Munteanu @maiamontagnarde
78 Followers 559 Following PhD student at @GenomeDataLab @UniOfYork alumna Dedicated plant mom
Benedetta Conte @BenedettaConte5
705 Followers 392 Following Oncologist | Marie-Curie PhD fellow. Based in Barcelona @idibaps. Main focus: #CancerResarch #BreastCancer #TranslationalResearch
Ferran Fece de la Cru... @FerranFeceCruz
595 Followers 2K Following Cancer researcher, Catalan, Instructor at @MGHCancerCenter & @harvardmed #CorcoranLab PhD in Malignant Diseases at @CeMM_News (Vienna) & @Ludwig_Cancer (Oxford)
Ganesha Pitchai @GaneshaPitchai
188 Followers 629 Following Biochemist, Dad @GenomicsUnit @OxfordAlumni #Biophysics #DNA Repair and Replication #Ubiquitin #BLM #CryoEM #Equalityinscience All views are my own
Liu Xiaoping 刘小�... @Liuxiaoping_WHU
237 Followers 1K Following Interested in single cell and spatial omics, digital pathology, cancer Fitness enthusiast，guitar noise maker LOVE CHINA
Xiang-Yu MENG @dr_xmeng
15 Followers 121 Following Xiang-Yu MENG, M.D.(WHU), Ph.D.(UPSaclay). Cancer, bioinformatics, and liquid biopsies.
Serena Nik-Zainal @SerenaNikZainal
7K Followers 626 Following Professor of Genomic Medicine | #NHS | needs regular snacks | delivers an effective roundhouse kick | Though she be but little, she is fierce
Nuria Lopez-Bigas @nlbigas
7K Followers 2K Following I DON'T USE TWITTER Follow me at: https://t.co/MqqQHVTPix ICREA at @irbbarcelona. Computational cancer genomics. Leading the @bbglab
Kelley Harris @Kelley__Harris
3K Followers 892 Following Associate Prof of Genome Sciences at UW. I use population genetic models to study the origins of genetic variation and the evolution of mutational processes.
Bartomeu Colom @Bartomeu_Colom
2K Followers 754 Following Senior scientist @altos_labs, previously @sangerinstitute. Stem cells, somatic mutations & cell competition in aging and early cancer. Views are my own.
Yuichi Shiraishi @friend1_ws
179 Followers 186 Following Chief, Division of Genome Analysis Platform Development, National Cancer Center Research Institute
Nature Cancer @NatureCancer
38K Followers 344 Following Nature Cancer is a journal dedicated to publishing the latest advances across all areas of cancer research.Trends for United States
You might like
