tskit-dev @tskit_dev
Updates from the tree sequence ecosystem. tskit.dev Up a tree Joined September 2022-
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Followers64
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Following23
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🎉 tskit 0.6.0 is released! 🎉 Thanks to our wonderful contributors, this is a bumper release. Read all about it at: tskit.dev/news/20241106-…
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tskit-dev retweeted
How to load 1.27 million Covid genomes, and their complex ancestry, into your laptop in ~1 second. If you're into #bioinformatics, help us improve our new software: virological.org/t/towards-pand…
🥳 tskit Python 0.5.5 and C 1.1.2 are released 🥳 This has the excellent random tree seeking by Kevin Thornton which makes hopping to a specific tree much faster. See the full release notes at github.com/tskit-dev/tski…
tskit-dev retweeted
Tomorrow at 1PM EST I'll be leading an "Intro to stdpopsim" workshop as part of #ProbGen2023. Zoom info attached if ppl would like to join remotely. Join us to learn about this incredible, community resource for simulation
tskit-dev retweeted
A new version of our slendr #rstats📦 is now on CRAN! Nothing dramatic, but you should upgrade if you can as it brings new convenience features and updates. There's one change worth talking about here, concerning the handling of Python environments. [1/7] slendr.net/news/index.htm…
tskit can make fancy 3D plots for your talks!
tskit can make fancy 3D plots for your talks! https://t.co/qIivhG3wyC
We've got a new marketing expert for the tskit ecosystem:
"The ARG revolution in population and statistical genetics" @WilderWohns talk at @OfficialSMBE is now available at: vimeo.com/759905338/2192…
tskit-dev retweeted
Here is @tskit_dev trying to cheer up their readers. Love it!
🎉tsinfer 0.3.0🎉 This release brings a set of fixes and features, including a substantial improvement in date estimation when tsdate is used after tsinfer 0.3.0. Read all about it here: tskit.dev/news/20221025-…
🥳tskit 0.5.3 is released!🥳 Available now on PyPI and conda. This point release contains some fixes and improvements. Full changelog: github.com/tskit-dev/tski… Thank you to all the contributors and the tskit community. ❤️
📣"The ARG revolution in population and statistical genetics" 👨🏫An invited keynote by @WilderWohns at the SMBEeverywhere symposium. 🗓️Sep 30th at 10am EDT Details here: tskit.dev/news/20220927-…
Regev Schweiger @RegevSchweiger
294 Followers 661 Following Incoming PI in the Faculty of Medicine and School of CS and AI @TelAvivUni (Oct 2025) 🧬 Director of Science @MyHeritage 🧬 Ex-postdoc @Cambridge_Uni
Savita Karthikeyan @savitakartik
44 Followers 156 Following
Nori @FindingNori_
29 Followers 273 Following Population Geneticist. Bioinformatician. Unravelling the genomic story of the Filipino people.
yaniv brandvain @yanivbrandvain
4K Followers 2K Following U of MN. dept plant bio... Silphium troll. I RT&endorse Silphium pics... GRFP examples: https://t.co/tzxD646zJV videos about evolution https://t.co/rk2I1zDFbR
Tran Lu Y Adrien 🧬... @TranLuY_Adrien
98 Followers 205 Following Post-doc @UZH_en . Population genomic of dolphins and orangutans. Previously deep-sea species (Corals and Hydrothermal vent) @[email protected]
Ahmed Selim @afselim97
11 Followers 65 Following Biophysics PhD student @ UChicago studying population genetics
Shazia Ruybal Pesánt... @DrShaziaRuybal
1K Followers 892 Following Genomic epidemiologist @Imperial_IDE @MRC_outbreak | A/Prof @IMUSFQ | Previously @WEHI_research @BurnetInstitute @unimelb @RLadiesMelb | 🇪🇨🇺🇸 in 🇬🇧
James Kitchens @kitchensjn
59 Followers 64 Following
Mark Ravinet @Mark_Ravinet
2K Followers 680 Following Ramen addicted evolutionary biologist working on genomics, speciation, sticklebacks and sparrows. Views my own. Now on Mastodon too: @[email protected]
R-Ladies Melbourne In... @RLadiesMelb
2K Followers 226 Following A local chapter of @RLadiesGlobal & a registered non-profit. Find us on Bluesky https://t.co/UUqQuaeN7b
Ryan Waples @WaplesRyan
30 Followers 71 Following
Giobbe Forni @forni_giobbe
155 Followers 428 Following evolutionary biologist / trait evolution / cook of spaghetti code
Marida Ianni-Ravn @mkiravn
242 Followers 541 Following Manifesting a PhD in Human Genetics in the Novembre lab at @HGEN_UChicago, previously at @uni_copenhagen & @Cambridge_Uni 🇬🇧🇮🇹🇩🇰🎨🕺🧬
Christian D. Huber @christiandhuber
1K Followers 2K Following Interested in population genetics, evolutionary genomics, bioinformatics, and statistics. He/him.
Natanael @N_t_n__l
266 Followers 1K Following
Shing @shingheizhan
847 Followers 451 Following Studying microbial evolution and recombination using computers and genomics | Views my own | @[email protected]
Andrea Fulgione @AndreaFulgione
337 Followers 226 Following No matter how beautiful your theory, No matter how clever you are or what your name is, if it disagrees with experiment, it’s wrong -- Richard Feynman --
allen @atongsa42
51 Followers 941 Following evolution/visual system/fly/neurogenetics. Languages shape the way we think 🦅🧬🌌👨💻🧮
Alexandre Aono @AonoAlexandre
228 Followers 467 Following
Rémi Tournebize @ArcimBoldique
161 Followers 836 Following Nous sommes faits de l'étoffe dont sont tissés les vents.
Hernán Morales @HernMoral
1K Followers 1K Following Globe Institute @uni_copenhagen. Evolutionary and conservation genomics group leader 🇲🇽in🇩🇰
Amandine Cornille (sh... @CornilleAmand
2K Followers 5K Following NYU AD Associate professor / Population Genomics / Adaptation/ Domestication/ Coevolution / Fruit Trees / GLobal changes/ Tweets are my own. @PommierVerger
Isidore HOUAGA @IsidoreHouaga
694 Followers 1K Following Roslin Foundation Fellow (Current), Royal Society Newton International Fellow (Alumni), Animal Quantitative Genetics and Genomics
santiago medina @santiago_gmm
176 Followers 441 Following graduate student at @langebiomx working with @apragsdale and @morestrada. population genetics and computational biology. 🇲🇽 Jiu-jitsu brasileño.
Tyler Kent @tylervkent
2K Followers 2K Following Postdoc @ University of Chicago E&E. Evolutionary genetics, music, cats, and cycling
Bing Guo @gbinux
26 Followers 59 Following
Kieran Samuk @ksamuk
2K Followers 2K Following Assistant Professor in the EEOB Department @UCRiverside. Studying evolution and recombination using genomics. 🇨🇦🔬🖥️. Also: @ksamuk.bsky.social
Bing Yang @BingYangHeart
289 Followers 1K Following Ph.D. candidate at CAU. Bioinformatics, Molecular Ecology, Molecular Evolution, Entomology, Computational Biology, Honey Bee🐝. [email protected]
Ornob Alam @genomeinquirer
349 Followers 797 Following Population genetics, rice domestication, herbarium specimens. PhD candidate in @LabPurugganan, @NYUBiology. Science writer @icddr_b.
Society for Molecular... @OfficialSMBE
10K Followers 3K Following SMBE fosters communication among molecular evolutionists and advances the field. 📢 by the Council 💬 @SMBEmeetings 👥 @SMBE_IDEA
Mammoth @ILU_LUCK
8 Followers 137 Following
Georgia Tsambos @GeorgiaTsambos
355 Followers 470 Following PhD graduate from the University of Melbourne, guitarist-by-night. Part of the Harris lab at UW. She/they.🔬🧬🚀🎸🕺🏽🏳️🌈
Aaron Ragsdale @apragsdale
936 Followers 429 Following assistant professor, department of integrative biology at uw-madison. population genetics and applied math. tweets are, regrettably, my own.
Angel G. Rivera-Coló... @arcolon14
500 Followers 754 Following Postdoc @ IE2 University of Oregon | PhD @ EEB UIUC | Evol & Pop Genomics, Bioinformatics | 🇵🇷 Scientist | @arcolon14.bsky.social | he/him/él
@[email protected]... @CastedoEllerman
50 Followers 122 Following @[email protected] Studying population genetics https://t.co/6SF7Uk8BIN
osmond-lab @osmond_lab
189 Followers 111 Following Modeling evolution with math at UofToronto. (Tweets by Matt Osmond.) @[email protected]
Andrew Kern @pastramimachine
14K Followers 3K Following Evolution, population genetics, machine learning. rhythm section.
Bhagyashri Chaudhari @Bhagyas75135586
60 Followers 2K Following
Dilek Koptekin @dilekopter
864 Followers 456 Following Find me on the other site! You know which one! @dilekopter.bsky.social Turkish & English
Vince Buffalo @vsbuffalo
16K Followers 3K Following Scientist at IDM. ♥s epidemiology, running, probability+statistics, 🦀, fly fishing, backpacking. Author of book Bioinformatics Data Skills. All views my own.
Aina Colomer-Vilaplan... @ainacolomaina
313 Followers 978 Following Bioinfo, Evo and PopGen; (re)tweeting about other stuff too (ella/she) 🐜🌱 també: https://t.co/xqTHDDtPyY
Dan Schrider @SamurSciCop
1K Followers 736 Following An aquatic ape studying population genetics at the University of North Carolina.
Gideon Bradburd @gbradburd
3K Followers 2K Following Assistant Professor at University of Michigan. Evolutionary biology, comp/stat bio, spatial population genetics, dad. also at https://t.co/sXqaXRKEK3. he/him
Mαყɾα Bαñυҽ�... @TalesOfDNA
267 Followers 451 Following PhD Candidate | Huerta-Sanchez lab @BrownCCMB | SFSU alumn | 2023 @HHMI Gilliam Fellow | @NSF GRFP Fellow | First gen | Pop gen | she/her 🇲🇽 🏳️🌈
Doc Edge @DocEdge85
4K Followers 3K Following Assistant professor in quantitative and computational biology @USC. Genetics, evolution, and a bit of statistics.
Society for Molecular... @OfficialSMBE
10K Followers 3K Following SMBE fosters communication among molecular evolutionists and advances the field. 📢 by the Council 💬 @SMBEmeetings 👥 @SMBE_IDEA
osmond-lab @osmond_lab
189 Followers 111 Following Modeling evolution with math at UofToronto. (Tweets by Matt Osmond.) @[email protected]
Angel G. Rivera-Coló... @arcolon14
500 Followers 754 Following Postdoc @ IE2 University of Oregon | PhD @ EEB UIUC | Evol & Pop Genomics, Bioinformatics | 🇵🇷 Scientist | @arcolon14.bsky.social | he/him/él
Vince Buffalo @vsbuffalo
16K Followers 3K Following Scientist at IDM. ♥s epidemiology, running, probability+statistics, 🦀, fly fishing, backpacking. Author of book Bioinformatics Data Skills. All views my own.
Graham Coop @Graham_Coop
19K Followers 2K Following Popgen @UCDavis. @[email protected] . Tweets, grammar, & spelling are my views only.He/him. #OA popgen book https://t.co/R6I2dcaEGf
Andrew Kern @pastramimachine
14K Followers 3K Following Evolution, population genetics, machine learning. rhythm section.
@[email protected]... @CastedoEllerman
50 Followers 122 Following @[email protected] Studying population genetics https://t.co/6SF7Uk8BIN
Doc Edge @DocEdge85
4K Followers 3K Following Assistant professor in quantitative and computational biology @USC. Genetics, evolution, and a bit of statistics.
Gideon Bradburd @gbradburd
3K Followers 2K Following Assistant Professor at University of Michigan. Evolutionary biology, comp/stat bio, spatial population genetics, dad. also at https://t.co/sXqaXRKEK3. he/him
Zamin Iqbal @ZaminIqbal
9K Followers 7K Following Professor of Algorithmic and Microbial Genomics at the University of Bath. Pathogens, genomics, genome graphs, antibiotic resistance, algorithms,data structures
Saurabh Belsare @smbelsare
331 Followers 919 Following Senior Scientist, Bioinformatics at @PacBio. Keen reader of most genres of books. Science enthusiast. Amateur student of Indian Classical Music.
Yu Sugihara @YuSugiharaY
1K Followers 1K Following Researcher at The Sainsbury Laboratory; Evolution | Population genetics | Plant-microbe interactions
Franz Baumdicker @fbaumdicker
363 Followers 453 Following Mathematical and Computational Population Genetics Microbial Evolution | Machine Learning in PopGen | CRISPR-Cas | Pan-genomes | HGT 🦠 ➔ 🧬 ➔ 💻 ➔ 🤔
Georgia Tsambos @GeorgiaTsambos
355 Followers 470 Following PhD graduate from the University of Melbourne, guitarist-by-night. Part of the Harris lab at UW. She/they.🔬🧬🚀🎸🕺🏽🏳️🌈
Luke Anderson-Trocmé @LukeAnderTroc
640 Followers 916 Following phd @McGillu w/ @SFGravel, postdoc @UChicago w/ @jnovembre
Chris Smith @chriscrsmith
164 Followers 200 Following Machine learning and population genetics. he/him/his
Ao Zhang @billyzhang1229
12 Followers 86 Following
Peter Ralph @petrelharp
2K Followers 2K Following Mathematical evolutionary biologist and population geneticist at University of Oregon. He/him/his. @[email protected]
Dr Yan Wong @DrYanWong
2K Followers 36 Following Evolutionary biologist, researcher @bdi_oxford, presenter of science on TV & radio. Now also at @[email protected]
Ben Jeffery @benjeffery
243 Followers 174 Following Recovering particle physicist, currently in a forest of tree sequences for genomics at the Big Data Institute in Oxford.
Jerome Kelleher @jeromekelleher
2K Followers 482 Following Research group leader at the Oxford Big Data Institute. Lead developer on tskit/msprime/tsinfer. He/him. 🇮🇪 @[email protected]Trends for United States
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