Emrah Şimşek @Emrah__Simsek
Assistant Professor of (Bio)physics at Univ of Florida. Studying life and death of microbes; biophysics, qBio, systems biology Gainesville, FL Joined May 2012-
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Emrah Şimşek retweeted
📢📢Hiring 2 Research Assistants & 2 Postdocs at @EmoryUniversity in Atlanta to study cytoskeletal biophysics/biochemistry. Please RT. RAs: great for recent bachelor's/master's in Physics/Bio/Chem/Biochem. Email CV and interests to [email protected]. shekharlab.org
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Emrah Şimşek retweeted
I am searching for a senior postdoc (3 +3 years) in the field of theoretical/ computational biology. The position provides the opportunity to interact with experimentalists and develop own research projects. Please RT Deadline: 11/09/2025 Details 👇: shorturl.at/iiiOv
Emrah Şimşek retweeted
The position of a senior postdoc (3 +3 years) in the field of theoretical biology is available in my group. The post provides the opportunity to closely interact with experimentalists and develop own research projects. Please RT. Details 👇: shorturl.at/iiiOv
Emrah Şimşek retweeted
Was extremely fun to work on this paper with @jerrywliu and finally fulfilling our 7 year plan from year one of undergrad to write a paper together! One of many I hope!
Was extremely fun to work on this paper with @jerrywliu and finally fulfilling our 7 year plan from year one of undergrad to write a paper together! One of many I hope!
Emrah Şimşek retweeted
Excited to share @NathanielBlalo2 and @srivsesh preprint teaching protein language models to generate beyond what evolution has explored. They introduce Reinforcement Learning with eXperimental Feedback (RLXF) to steer generation toward enhanced and non-natural functions.
Emrah Şimşek retweeted
Excited to share our latest work on unraveling the role of a key metabolic pathway in human gut microbiome assembly and health-relevant metabolites—powered by machine learning! Led by the talented Yiyi Liu sciencedirect.com/science/articl…
Emrah Şimşek retweeted
Join our interdisciplinary team developing computational approaches to understand and engineer biomolecular condensates. We’re looking for a postdoc—please apply or share with interested persons! 👩🏽💻💧🧬 puwebp.princeton.edu/AcadHire/apply…
Emrah Şimşek retweeted
1/ What's the worst enemy of a plasmid? Another plasmid! Our new study demonstrates synthetic plasmids engineered as "Trojan horses" to eliminate plasmids encoding antibiotic resistance. @DukeBiodesign @DukeUBME science.org/doi/10.1126/sc…
Emrah Şimşek retweeted
Join us this Friday, 3/7, from 3-4 PM in Wilkinson 021 to hear from our next guest speaker, Dr. Rodrigo Reyes! He'll discuss "Single-Molecule Tracking of DNA-Binding Proteins: Insights into Cellular Function and Genome Maintenance." Learn more here: biodesign.duke.edu/2025/02/27/cqb…
Emrah Şimşek retweeted
1/ Excited to share our latest work, just published in @nchembio! We demonstrate how population-level gene regulation can be dynamically controlled and amplified using programmable gene transfer. @DukeBiodesign @DukeUBME Link to paper: doi.org/10.1038/s41589…
Emrah Şimşek retweeted
please spread the word about this theoretical population biology workshop in chicago in june! should be really fun nitmb.org/modeling-and-t…
Linking spatial drug heterogeneity to microbial growth dynamics in theory and experiment biorxiv.org/content/10.110…
Emrah Şimşek retweeted
This one is quite interesting. biorxiv.org/content/10.110… It turns out that even a single microbe inside a host (C. elegans) is not governed by simple logistic growth, but the population exhibits bistability. With @nicvega1 lab
Emrah Şimşek retweeted
Great school one collective behavior in memory of Alma Dal Co next Sept in Venice. Terrific lineup of speakers almadalcoschool.github.io Application deadline Feb 2025, travel grants available!
Emrah Şimşek retweeted
First paper of our lab today @Nature by Nussi! We provide a real-time movie on how #transcription and #translation cooperate using multi-color #single-molecule FM: we find long-range #ribosome-#polymerase communication mediated by #RNA looping! @embl doi.org/10.1038/s41586…
First paper of our lab today @Nature by Nussi! We provide a real-time movie on how #transcription and #translation cooperate using multi-color #single-molecule FM: we find long-range #ribosome-#polymerase communication mediated by #RNA looping! @embl doi.org/10.1038/s41586…
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