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Pyro 1.9 is released, adding type hints by @ordabayevy, a Zuko normalizing flows tutorial by @FrancoisRozet, a simple RandomWalkKernel, new tutorials, and many bug fixes. github.com/pyro-ppl/pyro/…
How do you use Pyro/NumPyro? Let us know at forum.pyro.ai/t/pyro-numpyro…
NumPyro 0.13.0 is released with several enhancements and bug fixes. Pytree Distribution has a new design that makes it work under jax.vmap, thanks to @PierreGlaser. github.com/pyro-ppl/numpy…
Pyro 1.8.6 is released: Fixed support for torch 1.11, improved distribution docs, bugfixes with lots of community help. Thanks @FrancoisRozet @rtkushner @david_a_knowles! github.com/pyro-ppl/pyro/…
Pyro 1.8.5 is released with fixes to support PyTorch 2, new conditional inverse and compose TransformModules, and a substitute handler. Thanks to many new contributors! github.com/pyro-ppl/pyro/…
If you need a first draft Pyro model, try asking ChatGPT. For example: How can I use Pyro to learn user preferences among features based on sparse pairwise comparison data, using variational inference?
NumPyro 0.11.0 has been released, along with four new distributions: EulerMaruyama, GaussianCopula, MatrixNormal, LogUniform, a new tutorial for a text-based ideal point model, support for enumeration in SVI and rendering deterministic sites. github.com/pyro-ppl/numpy…
Pyro 1.8.3 is released: bug fixes, numerical improvements to Gaussians, optional mode to localize params in nn.Modules github.com/pyro-ppl/pyro/…
Pyro 1.8.2 is released with many minor fixes. github.com/pyro-ppl/pyro/…
Pyro 1.8.1 is released: Update to PyTorch 1.11; new tutorial on Bayesian workflow; animated plots in GP tutorial; render_model() now shows params; new distributions and samplers. Thanks @nipun_batra, @KarmPatel216, and others! github.com/pyro-ppl/pyro/…
I just got a hardcopy of my own book - it finally feels real :) I'm very happy with the print quality (see attached photo) - but you can still get the pdf for free from probml.ai if you prefer.
We are pleased to release NumPyro 0.9.0 which includes the new Stein variational inference, 4 new distributions, 5 new tutorials and examples, and many enhancements and bug fixes. github.com/pyro-ppl/numpy…
My 1st paper out in @NatureBiotech 🎉 Thread as promised👇 Cell2location, built from first principles, improves the sensitivity and scale of tissue atlasing (combines single cell + spatial transcriptomics). Amazing teamwork @bayraktar_lab @OliverStegle nature.com/articles/s4158… 1/n
My 1st paper out in @NatureBiotech 🎉 Thread as promised👇 Cell2location, built from first principles, improves the sensitivity and scale of tissue atlasing (combines single cell + spatial transcriptomics). Amazing teamwork @bayraktar_lab @OliverStegle nature.com/articles/s4158… 1/n
Pyro 1.8 is released: 4 new tutorials including single cell transcriptomics, SARS-CoV-2 lineage growth, and drawing with pyro.render_model(); 4 new autoguides and improvements to AutoMultivariateNormal. Thanks @vitaliikl, @ordabayevy! github.com/pyro-ppl/pyro/…
I'm pleased to announce the first public release of FlowTorch (flowtorch.ai), an open-source library for explicit Deep Generative Models with an initial focus on normalizing flows!
Sharing a description of TyXe arxiv.org/abs/2110.00276, a little pyro-based BNN library we designed with Hippolyt Ritter which started with his internship with Uber AI Labs and got presented last year at #ProbProg2020. 1/5
NumPyro 0.8 is released with new mixture|directional distributions, transforms, differentiable annealed importance sampling autoguide, tutorial on some strategies to deal with bad posterior geometric github.com/pyro-ppl/numpy…
What is Probabilistic Programming? + A quick & opinionated review of @mcmc_stan @pymc_devs @PyroAi @TuringLang @TensorFlow Probability (TFP) youtu.be/-C8PGgnF1yg using an example from @rlmcelreath's Statistical Rethinking book
The MuE method is now available as part of Pyro docs.pyro.ai/en/dev/contrib…. Big thanks to @ftzo for making this possible. AND Checkout talk and poster by @EliWeinstein6 icml.cc/virtual/2021/p…
Today we released scvi-tools v0.12.0. This release features better integration with @PyroAi thanks to @vitaliikl, some critical bug fixes for the Solo doublet detection method, and various other small changes. Highly recommend upgrading! docs.scvi-tools.org/en/stable/rele…
Rémi 〰️ @remilouf
6K Followers 1K Following LLMs & structured generation @dottxtai. @OutlinesOSS 〰️ . Alumni @ENS_ULM & @UniOfOxford. I wander.Thomas Wiecki 🐘 @t.. @twiecki
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0 Followers 407 FollowingGustavo De Mari Perei.. @guhdemari
449 Followers 5K Following machine learning, data science, software engineeringNicolas Beltran @nicolasvelezb
142 Followers 334 Following On a random walk. I mostly tweet about RL, AI safety, ML. PhD student @blei_lab Columbia.Ravi Deedwania @DeedwaniaRavi
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111 Followers 841 Following AI4science, autonomous scientific discovery, clean energy and sustainabilityxuan (ɕɥɛn / sh-ye.. @xuanalogue
5K Followers 978 Following PhD Student. MIT ProbComp / CoCoSci. Inverting Bayesian models of human reasoning and decision-making. Pronouns: 祂/伊 Mastodon: @[email protected]Federico Billeci @BilleciFederico
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116 Followers 451 Following PhD candidate in Mathematical Machine Learning with @tverven | Researching formal XAI | Maths nerd | Occasional producer of electronic musicMingchen Chen @MingchenC
208 Followers 3K FollowingLillo Carlino @LilloCarlin0
222 Followers 3K Following 100 anni fa ero un barbiere | ex Visiting @lo_zanzi, BCH, Boston | ex Intern @ CNTE, Niguarda, Milano | now PhD student @myUniSR mentored by @daweonlineMinhazul Islam @Minhazu64576356
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16 Followers 117 Following undergrad student in @KAISTofficial interested in computational neuroscience, representative learning. NYU exchange program for Fall semester 2024Paul O @sbguy8703
0 Followers 457 FollowingALL-Angelina @Sherough199527
9 Followers 747 Following Aproveite a oportunidade,junte-se a All,ganhe mais de 200 por dia,se estiver interessado,por favor,tome a iniciativa de conversar comigo em particular!Matthieu Thiboust @mthiboust
1K Followers 2K Following AI & Neuroscience enthusiast. Author of the free ebook 🧠+🤖 "Insights from the brain: the road towards Machine Intelligence" (2020).J-Ham @j_ham_mortgage
33 Followers 149 FollowingSeong Woo Han @seongwoohan29
37 Followers 189 Following CS PhD @Penn ML/Stats/CompBio | Prev @flatironCCM, @NYU_CourantRyan Taylor @CogArchitect
101 Followers 542 Following ML/AI engineer, researcher and something vaguely resembling a mathematician Principal AI Consultant at @rxmllc Views are my own.要協調性。 @against_harmony
6 Followers 175 FollowingSamuel Bozzi Baco @qymera
97 Followers 690 Following Não há libertação sem luta; não há luta sem resistência; não há resistência sem esperança! O Amor vencerá!Giulio Caravagna @gcaravagna
1K Followers 770 Following Associate Professor & Cancer Data Scientist. I run the Cancer Data Science Laboratory at @UniTrieste, Italy. Opinions are my own.Brian Griffin @1BrianGriffin
42 Followers 787 FollowingJack Pfeiffer @jackalack07
7 Followers 72 FollowingShiveswarran @Shives1205
32 Followers 236 FollowingL @L95010802
6 Followers 160 FollowingAlberto Caron @AlbiCaron
35 Followers 158 Following PhD Candidate in Statistics and Machine Learning @UCL and @turinginstDavid Fernandez @jedafeza
4 Followers 95 FollowingDarío González Pico.. @DarioGPicos
41 Followers 235 Following PhD Astronomy candidate at Leiden Observatory. Amateur astrophotographer.Makkunda Sharma @MakkundaSharma
109 Followers 1K Following Grad Student @CompSciOxford @StHughsCollege | Previously @IITDelhi CSbenjamin @__bgdc__
10 Followers 572 FollowingAndres Castillo @a_castillo_v
186 Followers 2K Following Lifelong learner. ML enthusiast. MASc @UofT, Civil Engineer @UNALoficial. I like maps and typography. My learning journey: https://t.co/GlVqUWbsJoKostas Tsampourakis @KTsampourakis
82 Followers 650 Following Stats PhD @EdinburghUni. Work on Prob ML, focus on SSM, Bayesian state estimation/filtering & learning dynamics. https://t.co/2xjHceuRKqPyTorch @PyTorch
380K Followers 77 Following Tensors and neural networks in Python with strong hardware acceleration. PyTorch is an open source project at the Linux Foundation. #PyTorchFoundationThomas Wiecki 🐘 @t.. @twiecki
18K Followers 2K Following CEO & founder of @pymc_labs - The Bayesian Consultancy https://t.co/pOpveNUsa3 @pymc_devs author.Dan Roy @roydanroy
45K Followers 2K Following ML / AI researcher, emphasis on theory. Research Director and Canada CIFAR AI Chair, @VectorInst Professor, @UofT (Statistics/CS)\mathfrak{Michael "Sh.. @betanalpha
12K Followers 278 Following Once and future physicist masquerading as a statistician. Reluctant geometer. @mcmc_stan developer. Support my writing at https://t.co/Ut25MyjIAy. He/him.Max Welling @wellingmax
33K Followers 432 FollowingZoubin Ghahramani @ZoubinGhahrama1
24K Followers 616 Following VP Research, Google DeepMind, ex-head of Google Brain. Professor at University of Cambridge. Machine Learning Researcher. ex-Chief Scientist & VP of AI, Uber.Theofanis Karaletsos @Tkaraletsos
4K Followers 2K Following Head of AI @cziscience | probabilistic and deep MLGenerate:Biomedicines @generate_biomed
4K Followers 52 Following As pioneers in generative biology, we're revolutionizing the way biotherapeutics are discovered and developed.ArviZ (@[email protected].. @arviz_devs
1K Followers 36 Following Twitter account for the ArviZ project Mastodon: @[email protected]nference @_nference
5K Followers 3K Following We are transforming healthcare by making the world's biomedical knowledge computable & advancing AI to serve patients while enabling scientific discoveries.LF AI & Data Foundati.. @LFAIDataFdn
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492 Followers 83 Following Differentiable Programming @NeurIPSConfElizabeth Wood 🧬�.. @lizbwood
2K Followers 2K Following Founder and CEO at @JURA_bio. What can we learn from building the world's largest collection of T cells and the tissues they attack? NYC | Boston | BaselEli Weinstein @EliWeinstein6
583 Followers 679 Following Postdoc at Columbia in @blei_lab // @jura_bio // statistics, biophysics, machine learningDebora Marks @deboramarks
4K Followers 186 Following Mission: design of biological interventions for environment and human health (to save the world)Rob Salomone @SalomoneRob
793 Followers 204 Following Probabilistic Machine Learning, Monte Carlo Methods, and fundamental methodology in Data Science and AI.Mark Fleharty @MarkFleharty
28 Followers 87 FollowingEli Sennesh @ESennesh
2K Followers 3K Following Husband to Linden; dog dad to Amber+Jazz; value function abolitionist. Licentious liberty language mobilizer. Judeo-Bolshevik Spiceposting. בחירות עכשיו!Emile van Krieken @EmilevanKrieken
2K Followers 1K Following Postdoc @ University of Edinburgh | Neurosymbolic Machine LearningAdam Golinski @adam_golinski
2K Followers 3K Following ML research @Apple, prev @OxCSML @InfAtEd, part of @MLinPL & @polonium_org 🇵🇱, sometimes funnyColin Carroll @colindcarroll
3K Followers 908 Following Software engineer @Google. Interested in Python, math, and machine learning. Not opposed to hiking, running, and biking. PyMC3 + ArviZ developer. he/his.J. Emmanuel Johnson @jejjohnson
879 Followers 3K Following 🇺🇸|🇦🇪|🇫🇷|🇪🇸| PostDoc CSIC | Machine Learning | MLOPs | GeoscienceAdam Paszke @apaszke
10K Followers 511 Following Author of PyTorch, Research Scientist at Google Brain. Currently working on dex-lang. MIMUW CS & Math graduate. [email protected]James Webber @james_t_webber
707 Followers 350 Following Just lurking now, if that @ ja.meswebber on bskyDavid Eriksson @davidmeriksson
345 Followers 358 Following Research Scientist Manager @Meta working on Bayesian optimization. ex-Uber AI Labs, PhD from Cornell. I like mountains & the Tampa Bay Lightning.Vitalii Kleshchevniko.. @vitaliikl
2K Followers 1K Following Researcher @bayraktar_lab @StatGenomics @teichlab @sangerinstitute | Physics & AI to study cells, cell circuits & brains 🧠 | #SingleCell+spatial | 🌍🇺🇦to🇬🇧Louis Mandel @reactiveml
58 Followers 125 Following Research staff member @IBMResearch. Maître de conférences @u_psud. NYC. Sometimes Paris. Tweets are my own.Yerdos Ordabayev @ordabayevy
79 Followers 102 Following ML Scientist @broadinstitute Contributor/maintainer @PyroAiHugging Face @huggingface
346K Followers 189 Following The AI community building the future. https://t.co/VkRPD0VKaZ #BlackLivesMatter #stopasianhateMax Balandat @MaxBalandat
300 Followers 56 Following Research Scientist Manager, Adaptive Experimentation team @Meta. Creator of BoTorch. Interested in Bayesian Optimization and the like. Scuba Instructor.Marco Cusumano-Towner @mcusumanotowner
45 Followers 243 FollowingHong Ge @Hong_Ge2
407 Followers 254 Following Machine learning researcher at U Cambridge; interested in theoretical and computational principles of Intelligence, often using Bayesian methodsJason Eisner @adveisner
8K Followers 550 Following Professor of CS at Johns Hopkins University, Director of Research at Microsoft Semantic Machines, ACL Fellow. My tweets speak only for me.Sasha Rush @srush_nlp
52K Followers 464 Following Professor, Programmer in NYC. Cornell Tech, Hugging Face 🤗 https://t.co/cZl0wTfqGzMatthew Johnson @SingularMattrix
12K Followers 3K Following Researcher at Google Brain. I work on JAX (https://t.co/UGa5tGfinF).Brian Patton @brianwa84
256 Followers 859 Following SW Engr, TF Probability, Play/Analytics/Site Optimizer/Trends. Married to Jessica. Image-bearing (non-secular) humanist. 'Weird' Christian. Opinions my own.Adam Gayoso @adamgayoso
1K Followers 655 Following Research Scientist @GoogleDeepMind | PhD from @ucberkeley in Computational Biology | Views are my own🔥囧Robert Osazuwa.. @osazuwa
3K Followers 823 Following Probabilistic machine Learning, causal inference, language models. Teach at https://t.co/6Cp4YPz2wB & @Northeastern, work at @MSFTResearch.Tuan Anh Le @tuananhle7
478 Followers 530 FollowingRomain Lopez @_romain_lopez_
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2K Followers 89 Following EECS | Computational Biology @ucberkeley Department of Systems Immunology @WeizmannScienceTom Rainforth @tom_rainforth
5K Followers 304 Following Senior research fellow (faculty) in machine learning at the University of Oxford, Head of RainML Research Lab (https://t.co/uuBwQ2WdMN)Yee Whye Teh @yeewhye
24K Followers 1K Following Find me @[email protected] Professor at @OxCSML, @oxfordstats and Research Director at @GoogleDeepMind. All opinions are my own.Generable @GenerableHQ
571 Followers 176 Following Computational oncology done right. Powered with Stan. Techstars NYC '17. Calibrated Webcast: https://t.co/GNx4TcndMEDustin Tran @dustinvtran
40K Followers 649 Following Research Scientist at Google DeepMind. I lead evaluation at Gemini / Bard. AI, Bayesian statistics, deep learning.Ought @oughtinc
2K Followers 18 Following Automate & scale open-ended reasoning Building @elicitorg, an AI research assistant Demos https://t.co/8UGlbJ1eVE Jobs & product roadmap https://t.co/oDFh35ACEGAndreas Stuhlmüller @stuhlmueller
2K Followers 176 Following scale up good reasoning @elicitorg work with me: https://t.co/YaXuuHFiYPAki Vehtari - @avehta.. @avehtari
11K Followers 315 Following Professor in computational Bayesian modeling @AaltoPML @CSAalto @AaltoUniversity, BDA3 and ROS co-author, @mcmc_stan and @arviz_devs developerDaniel Lee @djsyclik
2K Followers 2K Following Ramblings of a Bayesian statistician, dj, basketball theorist. @mcmc_stan developer, @ZelusAnalytics data scientistWe've started a crazy thing. More details coming soon. (also, we're hiring) spectrum.ieee.org/ai-and-common-…
I'm co-founding Basis Research Institute (basis.ai) with @ZennaTavares and Eli Bingham!! As Zenna said, more details soon... but check out this interview with Zenna and Basis research scientist Sam Witty!
We've started a crazy thing. More details coming soon. (also, we're hiring) spectrum.ieee.org/ai-and-common-…
And with that opportunity I am also happy to share our insitro-research code repo is up with its first public release being the code supporting this paper (also using @PyroAi in parts of it) github.com/insitro/insitr… and code for Del-dock github.com/insitro/insitr…
Beautiful new work “Del-Dock” on marrying DELs and docking stemming from the summer internship of @KShmilovich with us, led by him and Benson Chen, and our first of many works with @mmsltn and yours truly. What did we do? A brief 🧵1/6 Paper link: arxiv.org/abs/2212.00136
How many perceptions about what’s possible are limiting computational biology now? IMO probabilistic programming @PyroAi @pymc_devs opens the door to building computational models for custom questions & rare tech by many comp bio researchers not just few applied statisticians.
The delay is a bit smaller if we consider that experiments started in Aug 2015 and a preprint was published in Jan 2017. Still, I think the field could have moved much faster. ◼️ The perception that mass spec is not sensitive enough for single-cell proteomics delayed progress…
I have a great time organizing last year, and I am very happy to see that AISTATS will once again take place in Valencia. Good luck to Yingzhen, Stephan, Sanjoy, Jiaxin, and Gavin!
AISTATS 2024 will take place in Valencia next year: aistats.org/aistats2024/. Paper Deadline: Oct 13, AoE Program Chairs: Yingzhen Li (@liyzhen2), Stephan Mandt (@s_mandt) General Chair: Sanjoy Dasgupta Workflow Chairs: Jiaxin Shi (@thjashin), Gavin Kerrigan (@gavinkerrigan)
Two new lectures use #Bayesian statistics and #Python libraries @pymc_labs and @PyroAi to estimate and forecast AR(1) models. Check them out here: python.quantecon.org/ar1_bayes.html python.quantecon.org/ar1_turningpts…
Our Chief Scientist, Dr. Avi Pfeffer, has developed an open-source framework for building #AI systems. Scruff lets you implement different kinds of workflows with different data sources, models, and algorithms. Check it out! ow.ly/74hl50IB56c
Think Scruff is cool and want to learn more about it and work with it frequently? We are looking to grow our probabilistic programming group. Reach out to Bobby Mayfield ([email protected]) to learn more.
Google Summer of Code applications open today. Apply to work with me on making open source advanced probabilistic ML demos in JAX. Details: github.com/probml/pyprobm…
It was really a great experience to contribute to such a nice library. Thank you @ftzo for approving my PR! Thank you Prof. @nipun_batra and @patel_zeel_ to guide me in solving this PR. PR: github.com/pyro-ppl/pyro/…
Pyro 1.8.1 is released: Update to PyTorch 1.11; new tutorial on Bayesian workflow; animated plots in GP tutorial; render_model() now shows params; new distributions and samplers. Thanks @nipun_batra, @KarmPatel216, and others! github.com/pyro-ppl/pyro/…
Checkout our new paper at @eLife where we develop a probabilistic model for analysis of single-molecule fluorescence colocalization images using @PyroAi PPL doi.org/10.7554/eLife.…
All universities should adopt Statistical Rethinking as a part of STEM curriculum. The clearest & most practical statistics course that I ever saw - explaining scientists how to use & think w/ Bayesian statistics, causal inference, incl contributed @pymc_devs & @PyroAi tutorials.
Statistical Rethinking 2022 Complete Course is complete. 20 lectures from foundations of causal & Bayesian inference through DAGS, multilevel models & poststratified causal effects to Gaussian processes, Bayesian imputation & ODEs. Theatrical trailer: youtube.com/watch?v=BYUykH…
I just got a hardcopy of my own book - it finally feels real :) I'm very happy with the print quality (see attached photo) - but you can still get the pdf for free from probml.ai if you prefer.
Talking at @techreview's EmTech Digital in real physical life
@ZennaTavares will take a closer look at the emerging research that is applying predictive processing to bridge the gap to common sense by understanding how humans reason. #EmTechDigital
In some personal news: I joined Insitro as VP of DS/ML and will be leading our ML efforts. Very excited to contribute to the wider sector of drug discovery and ML, there is a lot of important and profound ML research needed to pursue this. I will be sharing opportunities!
We are excited to welcome @martha_rook, @Tkaraletsos, Ellen Berg and Jevan Soo Lenox to our team! Learn more about how their collective expertise will make an impact at insitro here: businesswire.com/news/home/2022…
It was a pleasure to work with @vitaliikl et al to bring cell2location into the scvi-tools ecosystem. Expect the same easy to use interface!
With @vitaliikl's longer🧵below, revision highlights include mapping fine-grained immune cell types in the human gut (with @elmentaite) and the scVI/pyro implementation of c2l (with @adamgayoso).
pyro: Deep universal probabilistic programming with Python and PyTorch Lang: Python ⭐️ 7248 #MachineLearning Author: @PyroAi github.com/pyro-ppl/pyro
My 1st paper out in @NatureBiotech 🎉 Thread as promised👇 Cell2location, built from first principles, improves the sensitivity and scale of tissue atlasing (combines single cell + spatial transcriptomics). Amazing teamwork @bayraktar_lab @OliverStegle nature.com/articles/s4158… 1/n
finally out @NatureBiotech: cell2location tool for integration of single cell & spatial transcriptomics! Tons of new work showing that we can resolve fine cell types in spatial RNAseq & comprehensively map tissues. With @OliverStegle, proud of @vitaliikl👇nature.com/articles/s4158…