ZENCODE-ITN @ZencodeITN

This project receives funding from the @EU_H2020 Research & Innovation Programme. Any related tweets reflect only the views of the project owner. Zebrafish FTW! zencode-itn.eu Joined August 2015

Tweets

331
Followers

172
Following

126
Likes

149

Damir Baranašić @CroBeaver

3 years ago

I am happy and proud that our DANIO-CODE @daniocode paper is finally out in Nature Genetics @NatureGenet! I wish to say thank you to everyone who helped and supported our work up until now, with the hope we can continue to deliver in the future as well! nature.com/articles/s4158…

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DANIO-CODE @daniocode

4 years ago

DANIO-CODE is proud to share our findings and a huge multi-genomics resource on the regulatory elements in the development of #zebrafish. We analyzed 1,802 previously (un)published sequencing data sets across 38 developing stages and 21 assay types. (1/n) biorxiv.org/content/10.110…

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Sanjana @Sanjana17791037

5 years ago

Really excited to share my first author paper from my thesis work published in @genomeresearch m.genome.cshlp.org/content/early/… In this study we show the presence of two different sets of antisense ncrna’s during zebrafish development.

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Aditi Kanhere @Kanhere_lab

5 years ago

Our work on antisense ncRNAs is now accepted and online in @genomeresearch. Congratulations to @Sanjana17791037 on her first author publication and hard work. Also @carninci and Hazuki for great collaboration, reviewers for constructive comments. @ZencodeITN

Sanjana @Sanjana17791037

5 years ago

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Fabio M. D'Orazio @FabioDorazio

5 years ago

We started the this project with the ambitious goal of studying how the germ line links generations at the beginning of life. Now I like to think that goal is achieved and we better understand how the germ line forms. Great thanks to all co-authors

ferencmueller @ferencmueller

5 years ago

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ferencmueller @ferencmueller

5 years ago

Please check out our paper in Developmental Cell (bit.ly/2Pu7xdP) on the 2 phases of chromatin accessibility and genome activation in zebrafish PGCs. By @FabioDorazio with @PiotrBalwierz @Circe777 and contributions @splendidsunjane B Cairns @Vaquerizas @BorisLenhard labs

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Daub Lab @daublab

6 years ago

Working in big and small collaborations, we see a strong need to combine the description of sequencing experimental designs and data to support the (re)usability of data and their sharing.

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ferencmueller @ferencmueller

6 years ago

Our new work on distinct transcription initiation regulation by cell cycle dynamics @zebrafish in bioRxiv: tinyurl.com/weaplrd by @j_wragg_bham with L Roos, @ncvetesic @BorisLenhard lab #generegulation

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ferencmueller @ferencmueller

6 years ago

Our ms on regulation of transcription in primordial germ cells is out in BioRxiv bit.ly/2tTXmoi led by @FabioDorazio @PiotrBalwierz with @vaquerizasjm @BorisLenhard B. Cairns lab #ZencodeITN #pgc #generegulation. See related study bit.ly/2sogBFX by @KettingLab

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Heisenberg Lab @HeisenbergCPLab

6 years ago

New paper alert!!! Read our latest by @CSchwayer to see how and why tight junction proteins phase separate and flow in vivo! A thread will follow soon :)

Cell @CellCellPress

6 years ago

New paper alert!!! Read our latest by @CSchwayer to see how and why tight junction proteins phase separate and flow in vivo! A thread will follow soon :) https://t.co/Rj7hWhkVWb

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James Briscoe @briscoejames

6 years ago

Exciting @Dev_journal special issue on chromatin & epigenetics Highlights the new technologies & thinking changing the field Many thanks to our editors @benoitbruneau, Haruhiko Koseki, Susan Strome and Maria-Elena Torres-Padilla for putting it together dev.biologists.org/content/146/19

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Piero Carninci @carninci

6 years ago

E' tempo per essere coinvolti personalmente in una grande scommessa,... milano.corriere.it/notizie/cronac…

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Aditi Kanhere @Kanhere_lab

6 years ago

Many Congratulations to Sanjana for successfully defending her thesis! @Kanhere_lab @ferencmueller @ZencodeITN

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Luciano Martelotto 🛠🧬💻🇦🇺 @LGMartelotto

6 years ago

Both platforms showing VERY CONSISTENT results! Comparative analysis of sequencing technologies for single-cell transcriptomics genomebiology.biomedcentral.com/articles/10.11…

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Anshul Kundaje (anshulkundaje@bluesky) @anshulkundaje

6 years ago

I'm starting to lose track of all the highly nebulous 3D genome terms TADs, microTADs, subTADs, domains, loops, contacts, CRDs. I love reading about this stuff but it's literally impossible to know exactly how these terms map to each other in different papers. Please standardize.

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ZENCODE-ITN @ZencodeITN

6 years ago

Great talk on the role of hand2 in mesothelial progenitors in zebrafish @karin_prummel @chrmosimann #EESCellTypes

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ZENCODE-ITN @ZencodeITN

6 years ago

Congratulations to our ESR Andrea for a successful PhD defense 🎉#DrMariossi

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ZENCODE-ITN @ZencodeITN

7 years ago

Congratulations to our ESR Ana Rosa for a successful PhD defense! #DrLopez

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ZENCODE-ITN @ZencodeITN

7 years ago

Congratulations to our ESR Sanamjet on successfully defending his thesis! 🎉

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ZENCODE-ITN @ZencodeITN

7 years ago

Today ESRs Swarnima Joshi and Sanamjeet Virdi from Strähle Lab at KIT published their first paper of which they are co-first authors. Check it out fresh from the press: journals.plos.org/plosone/articl…