Aziz Ebrahimi @aziz_aebrahimi
Plant genetics and genomics, Purdue University, USA scholar.google.com/citations?user… USA Joined May 2019-
Tweets539
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Followers166
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Following333
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There are three ways that governments and other conservation actors at all levels can monitor and protect genetic diversity, supporting the attainment of biodiversity goals and targets openaccessgovernment.org/article/protec… with @FrancineKershaw and @CoalitionConGen. @GEOBON_org @SCBConGen
Are you still struggling with the manual curation of TEs? Do you want to know the magic of cleaning TE MSAs with only a single button click? Welcome to try TEtrimmer (paper will come soon) github.com/qjiangzhao/TEt… I am also looking forward to discussing this with you in #ICTE2024
Ginger is flowering, and Morel is growing at Martell forest, Purdue University.
🌾🌾Attention breeders! 📢 Join us at our #QBMS R package workshop with Khaled Al-Shamaa @arphp ! 🤩#QBMS is developed by @ICARDA & partners 📅 April 28, 2024 ⏰1 pm (GMT+1) 🌐 ZOOM Secure your Spot NOW👉tinyurl.com/yyzy64a6 #rstats #Rprogramming #Plant #Breeding
Fritillaria imperialis Kaftar, Fars, Iran April 13, 2024 Elevation: 2400m #Fritillaria #Fritillaria_imperialis #Liliaceae #botany #wildflowers #Ecology #geophyte #LILY #wildlife
Another really great week of webinars from @forestservice. Today on assisted migration and tomorrow on adaptive silvicultural management, both for forests responding to #climate change. fs.usda.gov/research/produ…
Scientists' warning to humanity on tree extinctions Rivers et al. @MalinRivers @bgci @GTA_GTSG 📖ow.ly/KMuj50R9gSW #CelebratingBotanicGardens
Spring at Purdue campus!
Pantera: Identification of transposable element families from pangenome polymorphisms biorxiv.org/content/10.110…
Don't miss these beautiful flowers in #Jules Janick Botanical Garden.
Unique application of GPT-like LLMs to RNA! Model-prioritized mutations (via relative log likelihood to WT) seem to do pretty well on improving thermostability of 23S rRNA sequences. Always exciting to see sequence-based models do well for design. 😊 biorxiv.org/content/10.110…
Just one more! @BoilerBall
Venn diagram vs upset plot. Venn diagram can be effective in building intuition, w/ appropriate color scale for subset sizes & pointing out subset(s) of interest, in this case the 7-way intersect. I use ggVennDiagram (cran.r-project.org/web/packages/g…), as it has native upset plot support.
Introducing figeno, my visualization software for (epi)genomics🧬🎨. Supports many data types (bigwig, HiC, @nanopore data with base modifications, WGS...) and is easy to use with a GUI. Can visualize multiple regions (e.g. for breakpoints). github.com/CompEpigen/fig…
PAPipe: A Pipeline for Comprehensive Population Genetic Analysis buff.ly/3x7Gknd #science #evolution #biology #genome
Early Spring in Jules Janick Horticulture Garden.
Hacky trick to graph the states of one or more discrete (or continuous!) traits at the tips of a fan or arc style tree using #Rstats #phytools: blog.phytools.org/2024/03/hacky-…. (PS: the tree & data for this cool example come from @DamienEsquerre et al.)
🚀 Excited to share our #PopGenInR workshop resources with everyone! 🌍 Uniting for biodiversity with genetics & R. Dive in: - Tutorials: green-striped-gecko.github.io/kioloa/ - Code: github.com/mijangos81/Pop… - Presentations: youtube.com/@dartRverse - Slides: github.com/mijangos81/Pop…
Mushrooms rule: Fungal community composition predicts forest carbon storage at a continental scale @NatureComms @MAnthony02 @SwissForestLab nature.com/articles/s4146…
Kattie Osland @KattieOsla10885
84 Followers 5K Following
Emmy Gibbon @emmy_gib
53 Followers 5K Following
Grace Fleury @grac_fleu
87 Followers 5K Following
Devin Bolton @DBolton76874
88 Followers 3K Following
Ellie Tervo @EllieTervo59460
93 Followers 5K Following
Jame Breier @BreierJame15802
87 Followers 5K Following
Fannie Collins @ColliFann
45 Followers 5K Following
Sophia Vacheresse @SophiaVach35785
72 Followers 5K Following
Shira Peyton @ShiraPeyt
71 Followers 5K Following
Dr. Avril Harder @AvrilMHarder
518 Followers 1K Following Evolution & Genomics • Computational Biologist at HudsonAlpha Genome Sequencing Center • she/her 🇨🇦🇺🇸
Nayoung Park @yoi__DDang
31 Followers 316 Following
Ida Wahlquist @IWahlqui
82 Followers 5K Following
Elon Musk @EMusk21076
58 Followers 976 Following I created this private account due to what I’ve been hearing from my fan, so I decided to check on you and care you along my career
Valerie Doud @Val_Doud
1K Followers 2K Following retired science teacher, wife, mother of 3 redheads, grandmother, apple grower, proud union member #ScienceNotSilence #VaccinesWork #vote
Journal of Agricultur.. @JournalBotany
969 Followers 3K Following Journal of Agricultural science and Botany is a peer reviewed, open access journal with latest research publications.
Journal of Plant Scie.. @JournalPlant
2K Followers 5K Following The International Research Journal of Plant Sciences (IRJPS) (ISSN: 2141-5447) is an Open Access, peer-reviewed journal. (Email: [email protected])
Evolutionary Applicat.. @EvolAppJournal
2K Followers 2K Following Evolutionary Applications. Scientific journal. Evolutionary approaches to environmental, biomedical and socio-economic issues. Tweets by Social Media Editor
Chenxin Li, PhD (@che.. @ChenxinLi2
8K Followers 3K Following Or just Li | Postdoc @ UGA | Decoding how genome, development, and environment shape (specialized) metabolism | Also post data visualization
Rebecca_US_ @UsRebecca38479
13 Followers 1K Following
River Sutera @RivSute
14 Followers 3K Following
Adele Loewenstein @LoewensteAde
34 Followers 5K Following
Carlos Pavón @CarlosJPavonV
373 Followers 383 Following Associate Professor, National Autonomous University of Mexico. Biogeography/Diversification/Herpetology/Morphology/Systematics
Meri Kreidel @KreidelMer40879
31 Followers 5K Following
Ulises Calderon @UlisesCald28835
111 Followers 3K Following
McTosme @MTosme90504
55 Followers 1K Following I live alone now and enjoy business, traveling, shopping, food and music. I have a calm personality and I hope we can be friends.
Kara Ryan @KaraDoesScience
188 Followers 492 Following PhD student studying adaptation to extreme environments in 🐟🐟 (she/her)
Ellie Joll @JollEllie
19 Followers 31 Following grad student @plantchemecol studying SLF, obsessed with my cat. she/her/hers 🌳🍃😻
USagricultureUK @USagricultureUK
6K Followers 6K Following Follow for news & updates about American foods & farming. Promoting agricultural trade between US & UK. 🇺🇸🇬🇧 https://t.co/UX9w5NPf6P
Hassan Ouziadi حسن.. @OuziadiHassan
54 Followers 327 Following
Ali Raza @Ale_Raza6
4K Followers 5K Following #PlantBiotech 🧬 | Trying to understand how plants respond and adapt to abiotic stress conditions ☄️❄️🌋🌡🏞🌫🌏👨🔬| Open for collaboration📝 💻 | 🏏 ✍🏻
Ali Seifinejad @ASeifinejad
67 Followers 164 Following Neuroscientist. Sleep, Neuropeptides, Microglia.
Austin Koontz @austinkoontz11
152 Followers 337 Following Research Assistant in the Conservation Lab at the Morton Arboretum. MSc from Utah State University. he/him. @ecoevo.social
TWS Molecular Ecology.. @TWS_MEWG
292 Followers 212 Following The #MolecularEcology Working Group aims to promote scientific advancement by applying molecular techniques to wildlife ecology, management, and conservation.
Elsa569 @Elsa596
109 Followers 427 Following
Manny @williamskj66
489 Followers 2K Following I will cherish the fate between us. There are many things that we actually have to fight for by ourselves. Just like we just met on the dating website, this is
Purdue University NRE.. @NresPurdue
227 Followers 110 Following Official Twitter for Purdue Natural Resources and Environmental Science
asmita singh dhakal @asmisingh01
17 Followers 99 Following
Ron Kichurchak Jr �.. @RonKichurchak
7K Followers 7K Following Wetland ecologist/conservation biologist @NYSDEC. Fascinated with herps, inverts, and every other creature. MSc Wildlife Biology Clemson graduate. Views my own.
Abubakar Rabiu @EL_BURNER89
31 Followers 592 Following Genetics enthusiast, Aspiring plant geneticist and breeder.
Jagveer Singh @Jagveer50370927
23 Followers 153 Following
Laxman Singh @Lucky_1310
129 Followers 500 Following Researcher@ Alpine Botany (Himalaya). Medicinal & Aromatic Plants. Chemical Ecology. Bioprocessing and Optimization. Biodiversity Conservation and Managment.
Seema Sheth @SeemaSheth
3K Followers 3K Following Assistant professor in plant evolutionary/population/community ecology at North Carolina State University (she/her)
ForestGenomicsLab @forest_genomics
380 Followers 688 Following Forest Genomics Lab at NAU, we are a group of tree lovers interested in genomics, evolution and physiology | DEI in STEM
Enrico Gonzales @EnricoG87896327
18 Followers 188 Following
Binod Gyawali @gyawali_binod54
122 Followers 401 Following PhD student| Purdue University| Wheat Genetics|
Ali Sarkhosh @sarkhosh22
881 Followers 776 Following Associate Professor of Horticulture Science at the University of Florida working on fruit crops production and physiology
FACAI Purdue @FACAI_Purdue
135 Followers 122 Following Forest Advanced Computing and Artificial Intelligence (FACAI) lab @PurdueFNR led by Prof. Jingjing Liang (ecology) @alpenbering and Prof. Mo Zhou (economics)
Dr. Avril Harder @AvrilMHarder
518 Followers 1K Following Evolution & Genomics • Computational Biologist at HudsonAlpha Genome Sequencing Center • she/her 🇨🇦🇺🇸
Nayoung Park @yoi__DDang
31 Followers 316 Following
Valerie Doud @Val_Doud
1K Followers 2K Following retired science teacher, wife, mother of 3 redheads, grandmother, apple grower, proud union member #ScienceNotSilence #VaccinesWork #vote
EvolDir @evoldir
16K Followers 15 Following EvolDir (Evolution Directory) mailing list on topics of interest to evolutionary biologists (conferences, jobs, software, etc.). Twitter version by @rdmpage
Horticulture Research @Hortres
3K Followers 2K Following Horticulture Research is an open access international journal devoted to publishing original research results and reviews on the best research in the field.
SwissForestLab @SwissForestLab
2K Followers 1K Following Future of the Forest - Forests for the future: Advance the understanding of the complexity and the functioning of the world’s forest ecosystems
Journal of Plant Scie.. @JournalPlant
2K Followers 5K Following The International Research Journal of Plant Sciences (IRJPS) (ISSN: 2141-5447) is an Open Access, peer-reviewed journal. (Email: [email protected])
Theo Llewellyn @theo_llewellyn
1K Followers 711 Following Postdoc @imperialcollege & @NHM_London studying bark beetle-fungus symbiosis 🪲🍄🌲🧬 Language lover & dancer 💃🏻 gnc fag
IBMCP @IBMCP
7K Followers 750 Following Instituto de Biología Molecular y Celular de Plantas (Universitat Politècnica de València @UPV - Consejo Superior de Investigaciones Científicas @CSIC)
Harvard University He.. @HarvardHerbaria
2K Followers 249 Following The Harvard University Herbaria include 5+ million specimens of algae, bryophytes, fungi, and vascular plants, with complementary Libraries and Archives.
Chenxin Li, PhD (@che.. @ChenxinLi2
8K Followers 3K Following Or just Li | Postdoc @ UGA | Decoding how genome, development, and environment shape (specialized) metabolism | Also post data visualization
RCAC @ Purdue @PurdueRCAC
651 Followers 365 Following Purdue's Rosen Center for Advanced Computing (RCAC) provides advanced computational resources and services to support Purdue researchers.
Timothy Martin @treephys
2K Followers 3K Following Tree Ecophysiology Professor, University of Florida School of Forest, Fisheries, and Geomatics Sciences. Posts do not represent my employer. Same bsky username.
Mina Momayyezi @MinaMomayyezi
167 Followers 196 Following Plant Physiologist Postdoc Fellow at UC Davis
Michael Landis @landismj
4K Followers 3K Following evolutionary biologist at @WUSTLBio | phylogeny | biogeography | statistical models & methods | fond of Earth | he/him
paul frandsen @paulbfrandsen
1K Followers 1K Following entomology, mountains, evolution, caddisfly genomics 🧬, phylogenetics, and data science. also some cycling and (snow|skate)boarding. tweets are mine
Magdalen Lindeberg @MagdalenLindebe
1K Followers 586 Following Assistant Director (Communications & Senior Admin Mgr): Cornell's School of Integrative Plant Science. Background: BA Biology, PhD Plant Pathology.
paul hohenlohe @PHohenlohe
861 Followers 1K Following Biologist, evolutionary and conservation genomics; music @MulesGrass; privileged to have a home on Nimiipuu (Nez Perce) land
Brenna Forester, Ph.D.. @BrennaRForester
2K Followers 2K Following Conservation genomics, biodiversity protection. Biologist @USFWS Branch of Species Status Assessment Science Support. Tweets my own. She/her.
Gratitude @gratitude
433 Followers 0 Following
G-BIKE_COSTAction @gbike_cost
2K Followers 4K Following G-BIKE @costprogramme Action to integrate genetic and evolutionary knowledge into #conservation planning policies #conservationgenomics
Colaboratory @GoogleColab
53K Followers 2 Following Colaboratory is a data analysis tool that combines text, code, and code outputs into a single document.
Damon Lisch @DamonLisch
3K Followers 643 Following Associate Professor Purdue University Department of Botany and Plant Pathology. Interested in transposable elements, epigenetic regulation and genome evolution.
Kara Ryan @KaraDoesScience
188 Followers 492 Following PhD student studying adaptation to extreme environments in 🐟🐟 (she/her)
Ellie Joll @JollEllie
19 Followers 31 Following grad student @plantchemecol studying SLF, obsessed with my cat. she/her/hers 🌳🍃😻
The Plant Cell @ThePlantCell
35K Followers 1K Following Leading international society-published journal with fast turnaround time, true peer review by top plant scientists, first-class post-acceptance science editing
Bruce Reisch @reischnewyork
636 Followers 238 Following Cornell Professor of Grapevine Genetics and family genealogist.
Molecular Plant & Pla.. @MPlantPCom
9K Followers 510 Following Journals Publishing Exciting Research in Plant Sciences. https://t.co/H1t45rEg5n & https://t.co/676rZoiaEZ…
USagricultureUK @USagricultureUK
6K Followers 6K Following Follow for news & updates about American foods & farming. Promoting agricultural trade between US & UK. 🇺🇸🇬🇧 https://t.co/UX9w5NPf6P
bioRxiv @biorxivpreprint
128K Followers 23 Following The non-profit preprint server for the life sciences
Mariana Silva Artur �.. @plantscifyi
2K Followers 1K Following 'A biologist, grateful for the life' #seedresilience #desiccation #functionalgenomics 🌱💦🧬 Assistant Professor, @PPH_WUR @WURplant, NWO-Veni Laureate 2020
Ali Raza @Ale_Raza6
4K Followers 5K Following #PlantBiotech 🧬 | Trying to understand how plants respond and adapt to abiotic stress conditions ☄️❄️🌋🌡🏞🌫🌏👨🔬| Open for collaboration📝 💻 | 🏏 ✍🏻
Ali Seifinejad @ASeifinejad
67 Followers 164 Following Neuroscientist. Sleep, Neuropeptides, Microglia.
Ali Soltani @soltani61ali
1K Followers 819 Following Plant Genetics and Genomics @Bayer4CropsUS | Tweets represent my own opinion
Plant Abiotic/Biotic .. @Stressed_plants
4K Followers 3K Following #PlantSci #CropSci #AbioticStress #BioticStress #Drought #Salinity #Waterlogging #Insects #Metals #Virus #Fungi #Temperature #Pathogens #Climate #Food
César Terrer @c_terrer
2K Followers 757 Following Asst. Professor at MIT @terrerlab_mit @mit_cee Carbon-cycle, global change, nutrients, plants, soils, their interactions and everything in between.
IUFRO @IUFRO
14K Followers 503 Following IUFRO is the Global Network for Forest Science Cooperation. Retweets ≠ endorsements. Tweets by Executive Director Alexander Buck are signed -ab.
EMBL-EBI @emblebi
74K Followers 598 Following EMBL-EBI provides open biological data resources and tools, and performs basic research in computational biology. https://t.co/ax5VumVAyg
MSU Plant Resilience .. @MSU_PRI
2K Followers 816 Following The PRI facilitates interdisciplinary plant science @MichiganStateU. We're tackling the challenge of improving plant resilience in a changing world.
Abiotic Stress Tolera.. @AbioticStress
13K Followers 10K Following Highlighting work on #AbioticStress in plants #Drought #Salinity #Waterlogging #Flooding #HeavyMetals #Temperature #Nutrient #Oxidative #Hypoxia #Ozone #Light
TWS Molecular Ecology.. @TWS_MEWG
292 Followers 212 Following The #MolecularEcology Working Group aims to promote scientific advancement by applying molecular techniques to wildlife ecology, management, and conservation.
Catalan Initiative fo.. @CatBiogenoma
889 Followers 536 Following El projecte de seqüenciació del genoma de les espècies eucariotes dels Països Catalans 🧬🌱🦎
asmita singh dhakal @asmisingh01
17 Followers 99 Following
Clint Chapple @ChappleClint
674 Followers 386 Following Biochemistry, genetics, and molecular biology of plant secondary metabolism and its regulation. He, him, his.
Ron Kichurchak Jr �.. @RonKichurchak
7K Followers 7K Following Wetland ecologist/conservation biologist @NYSDEC. Fascinated with herps, inverts, and every other creature. MSc Wildlife Biology Clemson graduate. Views my own.
Evolutionary Applicat.. @EvolAppJournal
2K Followers 2K Following Evolutionary Applications. Scientific journal. Evolutionary approaches to environmental, biomedical and socio-economic issues. Tweets by Social Media Editor
There are three ways that governments and other conservation actors at all levels can monitor and protect genetic diversity, supporting the attainment of biodiversity goals and targets openaccessgovernment.org/article/protec… with @FrancineKershaw and @CoalitionConGen. @GEOBON_org @SCBConGen
Was an honor to write a Perspective on the evolution of the field of deep learning in genomics, contextualizing the innovative work of @KDudnyk47866 @zhou_jian in the same issue. Congratulations to co-writer Jun Wang @sanofi for her contribution here too! science.org/doi/10.1126/sc…
OpenAnnotateApi: Python and R packages to efficiently annotate and analyze chromatin accessibility of genomic regions academic.oup.com/bioinformatics…
On this Earth Day, our lab planted several butternut seed, which we hope will someday grow into a beautiful tree like this one, providing hope for this threatened species @IUCNRedList @forestservice
Are you still struggling with the manual curation of TEs? Do you want to know the magic of cleaning TE MSAs with only a single button click? Welcome to try TEtrimmer (paper will come soon) github.com/qjiangzhao/TEt… I am also looking forward to discussing this with you in #ICTE2024
Congratulations to former PhD student Dr. Samarth Mathur! Samarth won the Outstanding Dissertation Paper award from the Society for the Study of Evolution for his 2023 paper in Evolution. Great job, Samarth! academic.oup.com/evolut/article…
🌾🌾Attention breeders! 📢 Join us at our #QBMS R package workshop with Khaled Al-Shamaa @arphp ! 🤩#QBMS is developed by @ICARDA & partners 📅 April 28, 2024 ⏰1 pm (GMT+1) 🌐 ZOOM Secure your Spot NOW👉tinyurl.com/yyzy64a6 #rstats #Rprogramming #Plant #Breeding
Fritillaria imperialis Kaftar, Fars, Iran April 13, 2024 Elevation: 2400m #Fritillaria #Fritillaria_imperialis #Liliaceae #botany #wildflowers #Ecology #geophyte #LILY #wildlife
China's forests are working overtime! New study predicts a carbon stock boost by 13.6 Pg C by 2100, thanks to smarter trees and slick management. But watch out, ignoring tree cut-downs could turn our carbon sink dreams into nightmares a bit too early! nature.com/articles/s4146…
Another really great week of webinars from @forestservice. Today on assisted migration and tomorrow on adaptive silvicultural management, both for forests responding to #climate change. fs.usda.gov/research/produ…
Position open at Atlanta Botanical Garden to help manage our @NSF RAMP Rare Plants training grant. Great job to help coordinate mentoring of early career scientists in plant conservation, in a collaborative, inclusive atmosphere recruiting.paylocity.com/recruiting/job…
Our latest paper, on conserving profiles of local adaptation and led by @k_koreana , has now been published online by Diversity & Distributions. Check it out if interested in population genomics and/or environmental niche modeling. onlinelibrary.wiley.com/doi/epdf/10.11…
Check my first first-authored paper from DeWoody Lab! onlinelibrary.wiley.com/doi/epdf/10.11… We’ve reviewed papers used whome-genome and niche modeling and found several insightful ways to integrate them. I hope this can foster further integration of two great research approaches.
Our latest paper, on conserving profiles of local adaptation and led by @k_koreana , has now been published online by Diversity & Distributions. Check it out if interested in population genomics and/or environmental niche modeling. onlinelibrary.wiley.com/doi/epdf/10.11…
Scientists' warning to humanity on tree extinctions Rivers et al. @MalinRivers @bgci @GTA_GTSG 📖ow.ly/KMuj50R9gSW #CelebratingBotanicGardens
The whole world feels the impact of deforestation & forest degradation. @jingjinglAIng & colleagues in @science__i are building a global community to protect forests with the Global Big Ideas Competition and the Bridging Worlds Workshop at @LifeAtPurdue. ag.purdue.edu/news/2024/04/s…
Pantera: Identification of transposable element families from pangenome polymorphisms biorxiv.org/content/10.110…
Unique application of GPT-like LLMs to RNA! Model-prioritized mutations (via relative log likelihood to WT) seem to do pretty well on improving thermostability of 23S rRNA sequences. Always exciting to see sequence-based models do well for design. 😊 biorxiv.org/content/10.110…
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