Constantin Pape @cppape

Group leader @ Uni Goettingen applying Image Analysis and Deep Learning to large microscopy data in biology. Also @cppape.bsky.social user.informatik.uni-goettingen.de/~pape41/ Goettingen Joined December 2015

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Jan de Vries @Jan_de_Vries

2 weeks ago

We are hiring the second cohort of EvoReSt PhD students. If you are interested in deep evolutionary questions, checkout: uni-goettingen.de/de/687607.html Apply here: obp.uni-goettingen.de/de-de/OBF/Inde…

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Brian Northan @truenorth_ia

a month ago

I just published a video showing how to use Pixi and Napari-Easy-Augment-Batch-DL for reproducible deep learning segmentation. In this example, I use Pixi to set up a Python environment then launch Napari to explore and compare Cellpose3 and Micro-SAM. youtu.be/3ObAnSTBri8

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Constantin Pape @cppape

2 months ago

Looking for an opportunity to work on cutting super-resolution microscopy and AI? There's still time to apply to the two positions!

Constantin Pape @cppape

2 months ago

Looking for an opportunity to work on cutting super-resolution microscopy and AI? There's still time to apply to the two positions!

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Ali H. Shaib @AliHShaib

2 months ago

4th paper with my brother @AbedShaib. Second on AI. A shared path with our PhD supervisor Ute, who supervised me during my PhD & now supervises him. Proud of this new publication in @NatureComms. A big thank u to our Editor @sgqcheng & our collaborators! nature.com/articles/s4146…

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Nature Methods @naturemethods

2 months ago

Really excited to share this Perspective from John Danial covering how technology is moving the field of fluorescence microscopy toward structural biology. nature.com/articles/s4159…

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Constantin Pape @cppape

2 months ago

The science cuts are affecting incredibly important research. I am very sorry for Uri and the academic landscape in the US in general.

Uri Manor 💔 @manorlaboratory

2 months ago

The science cuts are affecting incredibly important research. I am very sorry for Uri and the academic landscape in the US in general.

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Faisal Mahmood @AI4Pathology

5 months ago

I shared my thoughts in a @NatureMedicine comment on the urgent need for more standardized benchmarks in #AI for biomedicine. nature.com/articles/s4159…

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Jon Barron @jon_barron

5 months ago

A thread of thoughts on radiance fields, from my keynote at 3DV: Radiance fields have had 3 distinct generations. First was NeRF: just posenc and a tiny MLP. This was slow to train but worked really well, and it was unusually compressed --- The NeRF was smaller than the images.

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Neuroscience and Beyond @neuro_beyond

5 months ago

Media can actually boost your child's language learning! The secret? Simply talk to them about what they watched. Include natural language variability, just like in everyday conversations. Prof. Mani @nivedita_mani from @uniGoettingen shares interesting facts and tricks for…

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Armando R @Armanduuum

6 months ago

I was trying to find Desmodesmus armatus in MoBIE (from an incredible plugin of @cppape and C. Tischer ) and a wild demon appeared 👹👹👽 #UExM #Microscopy

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Michał Januszewski @michalj

6 months ago

Can we predict future brain activity in a small vertebrate?🤔 We're releasing ZAPBench⚡️(#ICLR2025 spotlight): a benchmark to forecast activity in a whole vertebrate brain🧠 at single-cell resolution!🐟 70k+ neurons, 3 TB of data & extensive baselines. Connectome is coming! 🧵👇

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Neuroscience and Beyond @neuro_beyond

6 months ago

Ali @AliHShaib from @uniGoettingen co-developed the One-step Nanoscale Expansion (ONE) microscopy, a revolutionary, accessible super-resolution technique. ONE combines expansion microscopy with fluorescence fluctuation analysis, enabling visualization of protein structures at…

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Fabian Isensee @FabianIsensee1

7 months ago

nnU-Net v2.6 released! Most important change: Rework of the preprocessed data format 🚀 We now use Blosc2 for partially reading compressed files! Faster IO with less disk space required. Many thanks to Jan Sellner from @DKFZ_IMSY_lab and the @Blosc2 team for their amazing help!