Jim Haseloff @jimhaseloff
Plant Synthetic Biology and Biomaker: accessible tools for bioengineering haseloff.plantsci.cam.ac.uk University of Cambridge, UK Joined July 2009-
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Jumperless - a jumperless (solderless) breadboard! Learn more --> dky.bz/3qIj0cS
Tiniest Z-focus mechanism for you @seeedstudio #XIAO-based ESP32 camera in a #Matchboxscope? Found a way to piggy-pack all the electronics without any additional PCB😇Curious? Read more, here: matchboxscope.github.io/docs/XiaoMotor… Already part of the @OpenUc2-based #Anglerfish! Can drive NEMA!
Latest prototype of the MiniSpec Mk6. Using the lovely new ESP32-S3 chip from espressif. Capable of bluetooth, wifi, tons of storage, microSD up to 32gb. Can run 8 simultaneous turbidometers. 15mL working volume. 1Hz recording. Self-blanking. No fuss. Just turn on and it starts.
From design to practice - Check out our brand new maker station in the lab - with lots of @Prusa3D 3d printers. @GOSHCommunity @jimhaseloff @jenny_molloy Designed by team member Matías Hurtado cad.onshape.com/documents/24cc…
Insightful and worrying data about pressures on UK university funding, and need for response. apple.news/ACLiJfo1YSwGu1…
We used the TFClass framework (for mammals TFs) organized in Superclasses / Classes / Families (tfclass.bioinf.med.uni-goettingen.de) But 🍃plants🌸 have innovated A LOT and we had to add 8 new classes * and 37 new families * absent from TFClass
Here comes "Plant TF-Class": the first structural classification for 🌾plant 🌵transcription 🧬factors ⬇️⬇️ @TrendsPlantSci authors.elsevier.com/c/1hSk34rGdjWa… Work by @romain_bm, Renaud Dumas, Jérémy Lucas and Laura Turchi Video R. Dumas, "Dance With DNA" music Jason Dumas
Launch event of our @engbio compendium ‘accelerating research impact with open technologies’ Great turnout and conversations about available tools and resources. engbio.cam.ac.uk/projects/apply…
It's out! Read stories from @Cambridge_Uni on accelerating research impact through #opensource technologies for health & sustainability. Compiled by @EngBioIRC engbio.cam.ac.uk/projects/apply… #OpenScience
Day 8 of great synthetic biology papers. “Idempotent Vector Design for Standard Assembly of Biobricks” (2003). Genetic circuits rarely work on first try. It's hard to copy someone else’s work. So this paper standardized DNA assembly, much like screws were standardized in 1864.…
New: Associate Professor position in Synthetic Biology/Engineering Biology at the University of Cambridge. Looking for candidates with design-based bioengineering approach in plant biology. (jobs.cam.ac.uk/job/41746/)
Worth adding that these constructs and lines are great for looking at dynamic processes/development/responses to stresses, not just static patterns - my favourite being ERF20 and the re-making of stem cells
Super happy to see our work starting to get published, massive congratulations to Facundo and Susana for managing this (huge) project
Super happy to see our work starting to get published, massive congratulations to Facundo and Susana for managing this (huge) project
Have trouble keeping your plants alive? Can’t remember when you last watered your plants? Join a duo of lazy engineers to learn how you can monitor your plants with simple sensors and keep them alive for a little bit longer! Register today: loom.ly/1Q_42Js
We found promoters specific for several cell-types and share in the paper our main findings about meristem organisation in Marchantia. We also elaborated more detailed models for gemma development.
OpenPlant collection of TF promoters and cellular map for Marchantia gemmae, epic project guided by @facundoromani and @SusanaSaGu - should be a useful new resource for linking gene expression and cellular microarchitecture in Marchantia. (doi.org/10.1101/2023.0…)
The Collection of Bespoke Laboratory Equipment (COBLE) is accepted with minor revisions in #AppsPlantSci which means I can finally post our designs! Want to #3Dprint your own lab equipment? Download the designs and step-by-step instructions here! printables.com/model/45750-co…
Photography competition to celebrate the 100th anniversary of the British Bryological Society closes at the end of the month. Categories: bryophytes in the landscape, bryophytes under the microscope, close ups of bryophytes and bryologists in action. (britishbryologicalsociety.org.uk/year/2022-year…)
(Bonus) Use LEGOs to watch plant roots. It's just clear LEGO pieces and gel. But the advantage of LEGOs is that they can be autoclaved (didn't know that) and are a modular way to set up chemical gradients, etc. journals.plos.org/plosone/articl…
Useful listing of Wio termininal projects at: hackster.io/seeed/products…
Sebastian S. Cocioba�.. @ATinyGreenCell
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703 Followers 904 Following 修士(理学) 。メーカー技術者。コケ植物/受精/有性生殖/顕微鏡/bryology/sexual reproduction/fertilization/complex thalloid liverworts/microscopyOpen Hardware Lab @ F.. @OHL_FabLabMuc
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122 Followers 1 Following We use low code/no code to retweet anything low code/no code.I've been using these polypropylene snap-fit bead containers as petri dishes for about 6 years now and have not looked back. Smaller than standard but whatevs. Fully autoclavable and CHEAP. I get em from this fishing tackle store here: tidycrafts.com/products/copy-…
#PrintrLab incubator: A portable, low-cost (< $400) & #RaspberryPi-controlled #OpenSource CO2 #incubator based on a #3Dprinter architecture: -incl. web-based #Grafana dashbord doi.org/10.1371/journa… #DIYbio #lab #instruments #CellCulture
Here’s a great one-tube, four-step, 5–15 min DNA extraction method for on-bead PCR using alkaline polyethylene glycol (PEG) and paramagnetic beads. It could be very useful for point-of-need testing or other rapid field research. The method, by Lee et al. (2024), is called ASAP…
🎄🧑🎄Merry Christmas! 🎄✨ Excited to spread holiday cheer via our #SenseCAPIndicator's #UI, powered by SquareLine Studio's intuitive drag-and-drop editor. Now compatible with SenseCAP Indicator, you can easily create stunning graphical UIs using squareline.io
ZeroWriter: Open source, DIY E Ink typewriter that costs about $200 (or less) to build liliputing.com/zerowriter-ope…
Display potentiometer position on an LED ring light using a MAX7219 multiplexing module and an Arduino UNO: youtu.be/sE3LSYoCqLQ
RIP George Bruening
Multiple feedbacks on self-organized morphogenesis during plant regeneration 📖 ow.ly/sanR50Qai2U Tansley Insight article by Mathew et al. @MabelMathew_M, @ganguly_akansha, @kalikapg, @IISERPune #PlantScience #TansleyInsight
Who’s heard of the Mint Sauce Worm? The worm eats once early in life to ingest an algae which it then grows inside it for life to provide it with photosynthetic energy. Nice example of a holobiont. en.m.wikipedia.org/wiki/Symsagitt…
I’m having a wonderful time thus far and I’m really looking forward to a productive week and thanks to @jimhaseloff for the invite. Doing the final touches to the seminar presentation for Thursday. #PlantsAreLife #PlantSciences #MedicinaPlants
We're delighted to welcome @noxthelion of @StellenboschUni to the department for a week of research discussions, collaborations, seminars and more! 🌿 @jimhaseloff
#TansleyInsight Genome evolution in plants and the origins of innovation James W. Clark 📖 ow.ly/8Xav50Q8gfR @sometimesferns is a finalist in the 2023 New Phytologist #TansleyMedal competition.
The first author Go Takahashi @go_takahashi_go performed most of the experiments in this study, including the meristem imaging. His precise observation clarified the contribution of JINGASA in the control of the stem cell zone in Marchantia.
Our new paper out @CurrentBiology. We report JINGASA transcription factor as a regulator of stem cell division in Marchantia, providing an insight into the evolution of meristems in land plants. Share link: authors.elsevier.com/a/1i5x23QW8S2S…
Unlock the potential of Wio Terminal! 🚀Transform it into a powerful Human Machine Interface (#HMI) USB #display for #RaspberryPi, #Nvidia Jetson Nano, #BeagleBone, and #Odyssey X86J4105. Connect multiple Wio Terminals for enhanced capabilities—up to 4 on Raspberry Pi! 🖥️💡 Get…
A simple, small-scale #LEGO #colorimeter with a light-emitting diode (#LED) used as detector (unfortunately #NOpenAccess): doi.org/10.1021/ed4008… #DIYbio #lab #instruments #STEM #MINT #education
Modular Golden Gate Assembly of Linear DNA Templates for Cell-free Prototyping doi.org/10.48550/arXiv…
@TobiasVdb That could be the perfect size for your robot face. Looks like you can get the spi version and connect it to any micro: buydisplay.com/1-69-inch-280x…
A thread about some recently collected Blasia pusilla in the New Forest, described by Jean Paton as "a remarkable liverwort with many unique characters, making it one of our most easily recognised and interesting species"
Recently, I came across the web-based, interactive, & #opensource Optical Simulation tool #OPTICO 🔬 that allows students to virtually play around with mirrors, lenses, etc. 🚀 - Teachers & workshop leaders should try it out #openscience #openeducation 👉 optico.app/en/start-en/