Bioinformatics Explained @XBioinformat

Love to bring molecules to life by animating them. I will be posting pretty much only about that. #SciArt #MedArt #SciCom Oslo, Norway Joined January 2021

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Bioinformatics Explained @XBioinformat

4 years ago

How does one search for relevant mentions of the following human genes in the scientific literature? - IMPACT (uniprot.org/uniprot/Q9P2X3) - PIGS (uniprot.org/uniprot/Q96S52) - NHS (uniprot.org/uniprot/Q6T4R5) - SHE (uniprot.org/uniprot/Q5VZ18) @uniprot

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Bioinformatics Explained @XBioinformat

5 years ago

@buildmodels Amazing, I made a 360º render of #7DF3, #SARS_CoV_2 S trimer, S-closed (on the left) and #7DK3 #SARS_CoV_2 trimer, S-open (on the right).

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Bioinformatics Explained @XBioinformat

5 years ago

Animation around #SARSCoV2 #Spike mutations and deletions inferred to occur in the "UK variant" (B.1.1.7, 20I/501Y.V1) based on a report from @arambaut @pathogenomenick @EvolveDotZoo @wendybarclay11 @erikmvolz et al. for @CovidGenomicsUK

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Bioinformatics Explained @XBioinformat

5 years ago

From 2020.02.05 to 2021.01.27 at least 227 structures of #SARSCoV2 Main Protease were released on @buildmodels/@PDBeurope. More than half of them are authored by @FrankvonDelft, @Darenfearon, @DiamondLightSou, @MartinWalshDLS, @thesgconline, @london_lab, @rachaelskyner.

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Bioinformatics Explained @XBioinformat

5 years ago

All available #SARSCoV2 #Nsp3 structures from @buildmodels/@PDBeurope combined. The bulk being resolved by @fraser_lab, @mctucsf & @Darenfearon, @IvanAhelLab, @FrankvonDelft. Only chains A shown. Structures with high RMSD to ref excluded. #COVID19

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Bioinformatics Explained @XBioinformat

5 years ago

Cryo-EM structure of mature #Dengue #virus serotype 2. Reported by @CarriqueLoic, @Itziar_Serna, @denishkaria, @SerbanIlca, @jonathan_grimes, et al.

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Bioinformatics Explained @XBioinformat

5 years ago

#SARSCoV2 Spike protein, visualization of the #N501Y mutation at the protein-protein interface with #ACE2. Crystal structure deposited on @buildmodels by Jason Gorman, @strangeatoms et al. from @Columbia.

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Bioinformatics Explained @XBioinformat

5 years ago

Impressive work by @Darenfearon, @IvanAhelLab, @FrankvonDelft et al. Data from PanDDA analysis of #SARS_CoV_2 #Nsp3. This render is a combination of 104 PDBs from @rcsbPDB @buildmodels @PDBeurope. Only one protein structure shown, used to align the ligands from all the others.

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Bioinformatics Explained @XBioinformat

5 years ago

SARS-CoV-2 spike protein notable mutations. Based on the structure 7KNI from @rcsbPDB deposited by researchers from @Columbia @NIH @JohnsHopkins #n501y #D614G #E484K #SARSCoV2 #SARS_CoV_2 #Covid_19

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moved elsewhere:
🐘: bradyajohnston@aus.social
⛅️ @bradyajohnston
struc. biologist,
scientific animator,
creator of #MolecularNodes,
he/him
#rstats #b3d

Brady Johnston @bradyajohnston

16K Followers 2K Following moved elsewhere: 🐘: [email protected] ⛅️ @bradyajohnston struc. biologist, scientific animator, creator of #MolecularNodes, he/him #rstats #b3d

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Kelvin Lau 🧬🧪�... @klausenhauser

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Structural Biologist at Diamond Light Source UK. You can also connect with me at @walshdls.bsky.social…….views definitely my own

Martin Walsh OBE @MartinWalshDLS

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I'm a bot that surveys the cryoEM literature for you! Operated by @fredericpoitev1 & @CorneliusGati, adapted from PaperBots twitter app developed by @fxcoudert

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rcsb pdb 💉🧬💻... @buildmodels

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Assistant Professor at the University of Virginia, Biochemist, Molecular and Structural Biologist, Husband, Father, Traveller
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A scientific journal devoted to publishing the most compelling research, opinion and analysis at the intersection of chemistry and biology.

Nature Chemical Biolo... @nchembio

25K Followers 570 Following A scientific journal devoted to publishing the most compelling research, opinion and analysis at the intersection of chemistry and biology.

Marin van Heel @Marin_van_Heel

1K Followers 64 Following Image processing scientist. My two cents are mine, unless my account has been hacked ;)

How do membrane proteins work? Enjoying protein structure/function stories, drug discovery and cutting edge bio-technologies.

Peter Nollert @reducentropy

2K Followers 420 Following How do membrane proteins work? Enjoying protein structure/function stories, drug discovery and cutting edge bio-technologies.

desGeorgesLab @desGeorgesLab

1K Followers 197 Following Decoding receptors’ allosteric mechanisms through the lens of cryo-electron microscopy

Caitlin Bannan, PhD @Caitlin_Bannan

515 Followers 226 Following Computational Chemistry with some dancing and feminism on the side. Opinions my own. (she/her)

Maria Nagan @NaganMaria

443 Followers 133 Following prof of chem, computational rna structural biologist/pchemist, gardener, mother of 4

Theoretical chemistry professor at Virginia Tech. Any opinions expressed are my own.... and correct. (He/Him) @nmayhall@mastodon.social

Nick Mayhall @nick_mayhall

2K Followers 510 Following Theoretical chemistry professor at Virginia Tech. Any opinions expressed are my own.... and correct. (He/Him) @[email protected]

Michele Ceriotti @MicheleCeriotti

3K Followers 349 Following Italian in Switzerland, @lab_COSMO PI. Husband of one, father of three. Increasing the entropy of the universe since 1982.

Inorganic Design, Computational Chemistry, Machine Learning, and Enzyme Catalysis Research Group in Chemical Engineering at MIT. Led by Prof. Heather J. Kulik

the Kulik Group @KulikGroup

4K Followers 385 Following Inorganic Design, Computational Chemistry, Machine Learning, and Enzyme Catalysis Research Group in Chemical Engineering at MIT. Led by Prof. Heather J. Kulik

Scientist • Chemist 👩🏼‍🔬 •Software for Pharma/Chemical Industry • Need to know about molecules at the atomic level•Mom of Twins 🇱🇺🇪🇺

Mireille V. Krier @mvkrier

1K Followers 4K Following Scientist • Chemist 👩🏼‍🔬 •Software for Pharma/Chemical Industry • Need to know about molecules at the atomic level•Mom of Twins 🇱🇺🇪🇺

Chemist, Scientist, Husband, Dad, Runner, Teacher. I develop @AvogadroChem + @OpenBabel_org to find new materials for energy applications @Pitt_Chemistry he/him

Geoff Hutchison (@ghu... @ghutchis

2K Followers 2K Following Chemist, Scientist, Husband, Dad, Runner, Teacher. I develop @AvogadroChem + @OpenBabel_org to find new materials for energy applications @Pitt_Chemistry he/him

Stefan Raunser @Intein

3K Followers 431 Following Structural Biochemist @mpimoph. Views are my personal ones.

Vice-dean for research @AarhusUni @NatSci_AU. Structural neurobiology professor. Opinions are my own - on science and politics in Danish&English.

Poul Nissen🇩🇰�... @PoulNissen

3K Followers 1K Following Vice-dean for research @AarhusUni @NatSci_AU. Structural neurobiology professor. Opinions are my own - on science and politics in Danish&English.

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