Clint Valentine @clintcodesbio
All things bioinformatics at Fulcrum Genomics github.com/clintval Seattle, WA Joined August 2014-
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Natural sample grouping in MultiQC. Love to see it.
Natural sample grouping in MultiQC. Love to see it.
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Xfinity is terrible and they won't let me tell them.
Clint Valentine retweeted
Starship weighs 5000 tons on liftoff
Clint Valentine retweeted
Hello to all #bioinformatics #rustlang, I often copy code to generate data when writing tests. After 3 or 4 times, I got fed up and created biotest crates. biotest can generate fasta, fastq and vcf, I'm open to any suggestion, feedback or contribution. github.com/natir/biotest
Clint Valentine retweeted
Most cells in your body do not have DNA / genomes. ~ 90 % do not have DNA. ~ 10 % have DNA
This is a remarkable and necessary tool for the Nextflow community. So excited to see the developer experience get better! Now we can stop worrying about code style and get to workflow-making!
This is a remarkable and necessary tool for the Nextflow community. So excited to see the developer experience get better! Now we can stop worrying about code style and get to workflow-making!
So excited to announce @AMeynert has joined the @fulcrumgenomics team!
Clint Valentine retweeted
Two other resources of note for IGV: - Interactive guide to getting started with IGV: sandbox.bio/tutorials/igv-… - The supplement to this article, which is an incredibly comprehensive visual guide to reviewing somatic variants: ncbi.nlm.nih.gov/pmc/articles/P…
Two other resources of note for IGV: - Interactive guide to getting started with IGV: sandbox.bio/tutorials/igv-… - The supplement to this article, which is an incredibly comprehensive visual guide to reviewing somatic variants: ncbi.nlm.nih.gov/pmc/articles/P…
Clint Valentine retweeted
A key skill in bioinfo is assessment of raw seq data. Tools like IGV are useful to view aligned reads & variants. I've manually reviewed 1000s of variants and it's worth knowing what a real variant looks like! From Sirisha in the @nanopore #EPI2ME team: labs.epi2me.io/reviewing-bam
Fascinating blog post on the physics of flight with addicting interactive simulations! ciechanow.ski/airfoil/
Clint Valentine retweeted
Add coffee stains to LaTeX documents ctan.org/pkg/coffeestai…
10x can't possibly sue Singular over spatial sequencing since Singular's doing spacial (outer space!) sequencing instead. Heavy coin too. Maybe I got an ultra-rare misprint? #AGBT
Clint Valentine retweeted
The theme of #AGBT24 so far has been amazing molecular biology and technological innovations that solve problems previously requiring #Bioinformatics solutions.
It's me!
Clint Valentine retweeted
We are excited to launch the UG 100™ with substantial improvements in indel accuracy, achieving a 99.4% INDEL F1 score and unveiling our new ppmSeq™ technology, capable of achieving 1 in 1,000,000 raw read error rates for SNVs, or Q60-level precision. businesswire.com/news/home/2024…
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