Sudarshan A. Shetty (सुदर्शन शेट्टी) @gutmicrobe
Senior Scientist Bioinformatics and Microbiology | Danone Nutricia Research | Views are my own 🇮🇳 🇳🇱 @gutmicrobe.bsky.social The Netherlands Joined January 2010-
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Gouda, The Netherlands #KingsDay
Our latest work on epithelial models! Or what happens when a wonderful technician wants to give a go at writing! 🙏🙌🏻 @iScience_CP Exploring Host-Commensal-Pathogen Dynamics in Cell Line and Organotypic Human Intestinal Epithelial Models: iScience cell.com/iscience/fullt…
📢 Dear colleagues working on human mobility modeling and prediction -- we are excited to announce a new open dataset of human mobility which contains city-scale, longitudinal, anonymized, 100,000 individual mobility trajectories. Scientific Data: nature.com/articles/s4159…
𝐃𝐫. 𝐌𝐨𝐡𝐚𝐧 𝐖𝐚𝐧𝐢, Director @DBT_NCCS_Pune, was a cherished friend of ARI. He excelled as a scientist, personified gentle leadership, and exemplified true kindness. He led NCCS with few words but decisive actions. He is also a member of the MACS. 1/n
How to pick a problem. Today in @CellCellPress. 1/53 cell.com/cell/fulltext/…
Ever wonder what a kmer is or how they're used to classify DNA sequences? Check out the most recent episode of Code Club as I break down the RDP's Naive Bayesian 16S rRNA gene sequence classifier youtu.be/VbXkK_nsmu4
The past month I enjoyed lots of scientific outreach. I had the honor of presenting my research at the Dies Natalis of WUR (you can (re)watch youtu.be/gkCXa73qXCA?si…) and at the #KNVM2024. Stay tuned for updates on synthetic communities from the @clarabelzer group!
For everyone. Everywhere.
After a recent presentation by a GCP consultant, I asked if he could give e.g. of use cases where clients reported a significant ROI of using GenAI at scale. He couldn't give a concrete example, saying that many things were in the experimentation phase. [1]
After a recent presentation by a GCP consultant, I asked if he could give e.g. of use cases where clients reported a significant ROI of using GenAI at scale. He couldn't give a concrete example, saying that many things were in the experimentation phase. [1]
99% of AI applications are cool-looking demos. Don't get fooled by the hype. It takes a lot to build enterprise-grade products that deliver real value. Every week I talk to companies that want to use an LLM with their data. The demand is huge! Here is one idea: The use cases…
Multi-omic integration of microbiome data for identifying disease-associated modules | Nature Communications nature.com/articles/s4146… #Bioinformatics
Some views of weekend cycling around Bunnik, #Netherlands
Cryptic diversity of cellulose-degrading gut bacteria in industrialized humans science.org/doi/abs/10.112…
Position open in computational microbiome research for a postdoctoral or project researcher in our team at the Department of Computing, University of Turku, Finland. Application DL April 2. ats.talentadore.com/apply/1-2-tutk…
Apply to Nordic Summer School on Computational Microbiome Research in Turku, Finland / Aug 13-15, 2024. Applications submitted by April 8 will have a priority: sites.utu.fi/microbiomesumm…
Thank you @SeedWorldEU & everyone involved in this nomination! 🤗 I'm happy to keep pushing #seedresearch #seedscience #seedteaching forward @WURplant, @WUR, in Europe & in the world! 😉🌱🎉 #plantresearch #plantscifyi #seedworld #seednews
Thank you @SeedWorldEU & everyone involved in this nomination! 🤗 I'm happy to keep pushing #seedresearch #seedscience #seedteaching forward @WURplant, @WUR, in Europe & in the world! 😉🌱🎉 #plantresearch #plantscifyi #seedworld #seednews
nature.com/articles/s4146… happy to share our publication in @NatureComms. Big thanks to all co-authors @marnixmedema @ClaessenLAB @MAMgroupUMA @LeidenBiology @IHSM_CSIC_UMA @umadivulga @InfoUMA
#Microbiome 🦠🔬| ‘There is a lot of microbiology in Wageningen.’ Therefore, Thijs Ettema and Hauke Smidt are to establish the Wageningen Microbiome Center (WMC). Interested in learning more about this? Click the link! bit.ly/48st1ug
Interesting consideration for metabolic prediction models: Bacteroides thetaiotaomicron can ferment complex carbohydrates in the gut, impacting the whole microbiota. This study shows that polysaccharide molecular weight affects metabolic activity in Bt: journals.asm.org/doi/full/10.11…
cat is the most misused thing by programmers new to linux. I cringe every time someone uses it wrong in a bash script. Thread below with proper uses of cat only
Laboratory of Microbi.. @MIB_WUR
2K Followers 496 Following Laboratory of Microbiology @WUR 🇳🇱🌍 || Microbial genetics, ecology, physiology and evolution || https://t.co/DHugq7uGWC
GutMicrobiota Health @GMFHx
35K Followers 3K Following Gut Microbiota for Health by experts, for experts from medical & scientific communities. By https://t.co/bGngsUpgkM #GMFH2024 #health #microbiota #gutmicrobiota
Mick W@tson ↙️ @BioMickWatson
30K Followers 3K Following Bioinformatics | (meta) genomics | Data science. Some politics. Views are all my own and do not represent past, current or future employer.
Daniel Tamarit @DanielTamarit
2K Followers 2K Following Evolutionary biologist studying archaeal and bacterial genomes | Assistant Prof @BinfUtrecht @UUBeta 🇳🇱 | Previously @ettema_lab @MIB_WUR @_SLU @MolEvoUpp
Elisa Granato @Prokaryota
28K Followers 4K Following Microbiologist | @BBSRC Discovery Fellow | evolution & ecology of tiny things | @OxfordBiology @BiochemOxford | she/her 🇪🇺🦠🧫🔬
Marnix Medema @marnixmedema
6K Followers 2K Following Professor of Bioinformatics at Wageningen University, Visiting professor at Leiden University. Natural product discovery, microbiomes, method development.
Microbiome Virtual In.. @MicrobiomeVIF
3K Followers 563 Following • a free recurring bite-sized alternative to multi-day #microbiome conferences • ➡️ Every month, a new event... join the #MVIF community!
Elisabeth Bik @MicrobiomDigest
149K Followers 49K Following Science integrity consultant, PhD. #ImageForensics Previously @ Stanford and (gasp!) uBiome. She/her. elisabethbik.bsky https://t.co/V4MR7WVHiT 🇳🇱🇺🇸
Marcus Böhme @BoehmeMarcus
4K Followers 2K Following #Microbiota-#Gut-#Brain-Axis | from Early Life to #Aging | Neuroscientist | Working in R&D | Musician | PhD @uniklinik_jena | formerly @Pharmabiotic #cryanlab
Chris Greening @greeninglab
8K Followers 5K Following Professor & NHMRC Fellow at @MonashUni's Dept of Microbiology. Using microbes to tackle global challenges in health and sustainability. #FirstGen 🐶🇦🇺🌈🎹🌱
Nico Claassens @NicoC_MicSynBio
2K Followers 682 Following Associate Professor Microbial Synthetic Metabolism @MIB_WU Wageningen University | Synthetic Biology | Sustainability | @wyoungacademy | https://t.co/ig6RTKCmjs
Thijs J. G. Ettema �.. @Ettema_lab
4K Followers 947 Following Head of @MIB_WUR at @WUR | Intrigued by the small & under-appreciated | Microbial evolution | Transitions in the Tree of Life | follow me at @ettema.bsky.social
Detmer Sipkema @Detmer_Sipkema
740 Followers 143 Following transitioning to Bluesky: @detmersipkema.bsky.social marine microbiologist, evolution of symbiosis, sponges! aquaculture, marine natural products
Tarini Shankar Ghosh @tarini_ghosh
591 Followers 342 Following Assistant Professor in Computational Biology at IIIT-Delhi ... Loves data .. Loves microbes 🙂🙂🙂.. Formerly APC Microbiome Ireland
Katie Guzzetta 🌻 @ktguzz
5K Followers 1K Following All things #Microbiota-#Gut-#Brain Axis!👩🔬💩 Postdoc w/ @randall_platt @ETH_BSSE🇨🇭 Formerly @HamiltonCollege🇺🇲 ➜ @Pharmabiotic🇮🇪 ➜ @harvardmed
Laura Villanueva @VillanuevaLaury
2K Followers 1K Following Marine geomicrobiologist and lipid lover from Barcelona, living in Texel with a dutch husband, three dutch-spanish kids and a cat. She/her
Jonathan Eisen @phylogenomics
66K Followers 10K Following Bio. Prof. @UCDavis "All microb(iom)es, all the time" Lab: https://t.co/XVzbMvveOE Ted talk: https://t.co/74jjCOFY90 Pics: https://t.co/waXqjRp6Pc
Sarah Lebeer @SarahLebeer
3K Followers 2K Following Microbiologist & Bioengineer @UAntwerpen, #lactobacilli, #probiotics & #microbiome @ISAPPScience #ERCStG Lacto-Be @Isala_UAntwerp. Mother of 3 fantastic kids
Kristina Campbell, mi.. @bykriscampbell
15K Followers 6K Following Reporting on the front lines of microbiome science. Health, diet, medicine, biotech. She. Mastodon @[email protected]
Andy @AndyFoster_1
182 Followers 3K Following Just visiting this planet… And while I am here I’d like to see as much, and taste, and listen to, and meet and enjoy as many others company as possible
Carol @cames1978
15 Followers 88 Following I moved here from Michigan in 1990, so I guess that makes me a Cracker now. I have two great kids. Just enjoying life!
Jessy Langsam @JessyLangs39998
68 Followers 5K Following
Harlie Medford @HarlieMedf71214
103 Followers 5K Following
Antonetta Duplessy @AntonettaD87142
91 Followers 5K Following
Ernestina Bedner @bedner_bedne
78 Followers 5K Following
Arijit Das @genetish
284 Followers 2K Following Ponderer, Science Lover, Curious, Sapiosexual, Quant, Voracious reader, Egalitarian, Investment Banker. Alumnus of Presidency College, IIT Kanpur & IIM Indore.
Luna Wescovich @lun_wescov
50 Followers 5K Following
mona jahani @mona_jahani
237 Followers 4K Following
Anny Camargo @Draannycamargo
81 Followers 201 Following Médica - PhD(c) Ciencias Biomédicas URosario, Docente de medicina UBoyacá, Investigadora Centro de Investigaciones en Microbiología y Biotecnología UR 🇨🇴
@madeintheUSA @madeintheUSA0
189 Followers 2K Following
Mila-rose Ashmore @AshmoreMil99014
63 Followers 5K Following
Aaditi Rautmare @AaditiRautmare
28 Followers 205 Following Biotech Scholar 🎓 | Young Researcher🔬 | Aspiring PhD🌟 | Science Communicator 🌐 "On a journey, where every experiment has a story waiting to be told"
Ken Lindstedt @KenLindstedt
30 Followers 59 Following PhD candidate @UiTromso Focusing on Klebsiella pneumoniae gut colonisation
Suzette Lecain @LecainSuze17455
77 Followers 5K Following
Zoi Ortz @zo_ortz
85 Followers 5K Following
Tanaya @Tanaya811775
1 Followers 40 Following
Manideep @ItsManideepb
72 Followers 1K Following Research scholar|| Interested in Bacteria, their viruses, consciousness and evolution|| Cricket. Bits Pilani.
Nikita Nimbark @nikkinimbark
41 Followers 701 Following
Tanya Murphy @murphy_tan12221
31 Followers 453 Following Executive Director of the Rome Foundation and an accomplished educator, director, and leader.
Sharell Glaab @share_gla
49 Followers 5K Following
José Jaime Martínez.. @JJaimeMarti
569 Followers 4K Following Husband, Science, BSc. at @unam_fesz and MSc. at @UNAM_MX, PhD at @UJAT, Postdoc at @Yale
Picks @KCMHealthSports
64 Followers 603 Following
Laquanda Carcana @LCarcana72163
130 Followers 5K Following
Rebeca Stulick @r_stuli
71 Followers 5K Following
Puspendu @Puspendu71
12 Followers 50 Following Bioinformatician @Cambridge_Uni. Metagenomics, Cancer immunotherapy, Next-generation sequencing, Holobiome, Disease microbiome. 🇮🇳➡️🇩🇪➡️🇨🇿➡️🇬🇧
Sylvester Nanayaw Gid.. @gyamfi_nanayaw
84 Followers 1K Following A biological Sciences student hoping to explore the science of life❤️🥰✈️🎓🎓
Emilia Johnso @EJohnso32274
58 Followers 5K Following
Cami Cannell @CamiCannel38449
60 Followers 5K Following
Izzie Mccloudy @mcclou_izz
35 Followers 5K Following
Kallie Norkus @KallieNork75053
64 Followers 5K Following
Shahraiz Khan @ShahraizKh86748
1 Followers 94 Following
Tajuana Tobery @TajuaTobe
51 Followers 5K Following
Billye Werline @WerliBill
89 Followers 5K Following
Yang Yue @YangYue_Plant
128 Followers 834 Following Wellcome Trust funded EDESIA Programme PhD student at the John Innes Centre & Quadram Institute.
Cortney Suchy @cortney_su
37 Followers 5K Following
Ruben L. Sanchez-Niev.. @RL_Sanchez1
60 Followers 120 Following PhD in Microbiology. Strain Safety and Genomics for IFF. Passionate about Probiotics, Microbiomes, and all things Microbes for the betterment of Society.
Ruby Hammerlund @r_hammerl
42 Followers 5K Following
kaehreqw8stoiv @gd2ny55xjt78jr
2 Followers 322 Following If you want to make friends, you can contact me anytime TG：https://t.co/VCmvhCc0dz
Kristoffer Sahlin @krsahlin
995 Followers 625 Following Assistant Professor at the Department of Mathematics, Stockholm University, and a @Scilifelab Fellow. Algorithms, Modeling, Transcriptomics, Genomics.
Jacki Baddley @BaddleyJac55959
69 Followers 5K Following
Sean Gibbons 🦠💩.. @gibbological
5K Followers 2K Following microbiome science | associate professor @isbsci | affiliate prof @UWBioE & @uwgenome | @uwescience & @AMIposts fellow | systems bio of 💩 🦠 | 🏳️🌈 he/him
Laboratory of Microbi.. @MIB_WUR
2K Followers 496 Following Laboratory of Microbiology @WUR 🇳🇱🌍 || Microbial genetics, ecology, physiology and evolution || https://t.co/DHugq7uGWC
Oded Rechavi @OdedRechavi
139K Followers 1K Following Don't be fooled by the rocks that I got, I'm still Oded from the block. TED: https://t.co/rcOm9TSTf5 Huberman Lab Podcast: https://t.co/xZTNlx9nbi
GutMicrobiota Health @GMFHx
35K Followers 3K Following Gut Microbiota for Health by experts, for experts from medical & scientific communities. By https://t.co/bGngsUpgkM #GMFH2024 #health #microbiota #gutmicrobiota
Mike Jetten @msmjetten
7K Followers 616 Following Professor in Microbiology at Radboud University NL, anammox, anaerobes metagenomics, research strategy, strategic recruitment, gender equality, SIAM
Nature Microbiology @NatureMicrobiol
72K Followers 2K Following Nature Microbiology publishes the latest research and commentary in all areas of microbiology.
Mick W@tson ↙️ @BioMickWatson
30K Followers 3K Following Bioinformatics | (meta) genomics | Data science. Some politics. Views are all my own and do not represent past, current or future employer.
Daniel Tamarit @DanielTamarit
2K Followers 2K Following Evolutionary biologist studying archaeal and bacterial genomes | Assistant Prof @BinfUtrecht @UUBeta 🇳🇱 | Previously @ettema_lab @MIB_WUR @_SLU @MolEvoUpp
Elisa Granato @Prokaryota
28K Followers 4K Following Microbiologist | @BBSRC Discovery Fellow | evolution & ecology of tiny things | @OxfordBiology @BiochemOxford | she/her 🇪🇺🦠🧫🔬
Host-Microbe Interact.. @HostMicrobeLit
4K Followers 344 Following Not a bot. Post-doc trying to make it easier to keep up with literature and promote good research conduct.
Marnix Medema @marnixmedema
6K Followers 2K Following Professor of Bioinformatics at Wageningen University, Visiting professor at Leiden University. Natural product discovery, microbiomes, method development.
Torsten Seemann @torstenseemann
16K Followers 2K Following Microbial genomics, bioinformatics software, training. A/Prof ORCID: 0000-0001-6046-610X Retro 8-bit computers; VIC=20, C=64, C=128.
Akos T. Kovacs @EvolvedBiofilm
20K Followers 2K Following Professor of Microbiome Ecology at Leiden University🇳🇱 (part time at DTU 🇩🇰): Biofilms, Experimental Evolution, Sociomicrobiology, Plant microbiome
Nicola Segata @nsegata
5K Followers 905 Following Professor at @CIBIO_UniTrento and head of the @cibiocm lab working on metagenomics, the human microbiome and computational biology.
Microbiome Virtual In.. @MicrobiomeVIF
3K Followers 563 Following • a free recurring bite-sized alternative to multi-day #microbiome conferences • ➡️ Every month, a new event... join the #MVIF community!
Elisabeth Bik @MicrobiomDigest
149K Followers 49K Following Science integrity consultant, PhD. #ImageForensics Previously @ Stanford and (gasp!) uBiome. She/her. elisabethbik.bsky https://t.co/V4MR7WVHiT 🇳🇱🇺🇸
Marcus Böhme @BoehmeMarcus
4K Followers 2K Following #Microbiota-#Gut-#Brain-Axis | from Early Life to #Aging | Neuroscientist | Working in R&D | Musician | PhD @uniklinik_jena | formerly @Pharmabiotic #cryanlab
Chris Greening @greeninglab
8K Followers 5K Following Professor & NHMRC Fellow at @MonashUni's Dept of Microbiology. Using microbes to tackle global challenges in health and sustainability. #FirstGen 🐶🇦🇺🌈🎹🌱
Nico Claassens @NicoC_MicSynBio
2K Followers 682 Following Associate Professor Microbial Synthetic Metabolism @MIB_WU Wageningen University | Synthetic Biology | Sustainability | @wyoungacademy | https://t.co/ig6RTKCmjs
Anjali Nayar @anjalinayar
3K Followers 715 Following Director of HACK YOUR HEALTH, CLOSER, SILAS, ESCAPE, GUN RUNNERS Founder of TIMBY (https://t.co/p4J8ZLgTUn)
Alfredo Andere @AlfredoAndere
4K Followers 1K Following Co-Founder and CEO @LatchBio — The Cloud for Biology
Seerave Foundation @SeeraveF
114 Followers 69 Following The Seerave Foundation aspires to broaden and enhance the Standard of Care for cancer patients. We focus on microbiome x immune system x cancer axis
Francesca De Filippis @Francy0870
479 Followers 1K Following Associate professor @UninaIT - interested in microbial ecology, food microbiome, human microbiome
Dan Sprockett @DanielSprockett
2K Followers 3K Following @CIHMID Postdoc Fellow @CornellEEB studying #microbiome community assembly, transmission, and evolution. @Stanford M&I Alumn @MicrobiomeData Champion
Alessandro (Ale) Poca.. @alee5z
1K Followers 1K Following Sr Director @J&J | Scientific Strategy & Innovation
BioSB @BioSB_nl
751 Followers 117 Following The BioSB research school offers a vibrant environment for the scientific development of, and the education in integrative bioinformatics and systems biology.
Antonio Camargo @apcamargo_
462 Followers 301 Following Scientist at @JGI. Likes bioinformatics stuff. @[email protected]
biorxiv in plain engl.. @biorxivenglish
457 Followers 1 Following @biorxivpreprint tweets in plain english not affiliated with @biorxivpreprint
Mahesh Desai Lab @MDesai_Lab
242 Followers 97 Following No guts, no glory! Nutrition, Microbiome and Immunity group at Luxembourg Institute of Health.
PNASNews @PNASNews
180K Followers 1K Following Cutting-edge news & reports from PNAS, one of the world's most-cited scientific journals, sibling journal of @PNASNexus & an official journal of @theNASciences.
Ali Ebrahimi @AliEbrahimi_MIT
383 Followers 561 Following Principle computational biology scientist @TakedaPharma, previously @GSK, @ETH, @DSMfirmenich and @MIT
Gabriel Leventhal @gaberoo
489 Followers 545 Following CSO/Head R&D at PharmaBiome AG. Evolutionary Micro-(Ecol/Biol)ogist & Physicist. Also: Baker, Beer Brewer, and tinkerer. @[email protected]
Kristoffer Sahlin @krsahlin
995 Followers 625 Following Assistant Professor at the Department of Mathematics, Stockholm University, and a @Scilifelab Fellow. Algorithms, Modeling, Transcriptomics, Genomics.
Florian Plaza Oñate @fplazaonate
236 Followers 126 Following Microbiome Data Scientist at MetaGenoPolis (@MgpsLab)
Indian Tech & Infra @IndianTechGuide
472K Followers 36 Following Everything about Indian technology, infrastructure, and economy. The opinions expressed here are strictly personal. Insta: https://t.co/E9dK2T0y5q.
Scientists for Global.. @ResponsibleSci
4K Followers 1K Following UK membership org; issues: nuclear disarmament; climate+sustainability; military misuse of sci/tech; corporate sci bias; ethical STEM education. RT≠endorsement
Abhishek Sengupta @Sengupta_PhD
334 Followers 2K Following Assistant Professor @AmityUni Research interests are Systems Biology, Multi-'omics' data analytics, Microbiome, Vitiligo, Reproductive Health
GNPS - UC San Diego @GNPS_UCSD
3K Followers 76 Following Online mass spec analysis platform that enables global visualization and interpretation based on crowd sourcing. #molecularnetworking #massspec
Stephen Turner @strnr
30K Followers 586 Following Data scientist, bioinformatician, dad, runner, guitar noise-maker. Views my own. https://t.co/isjce46fPW
Physalia-courses@ONLI.. @Physacourses
6K Followers 1K Following We offer scientific training courses in #Bioinformatics #Genomics #evolution #python, #rstats https://t.co/NZ0vU7lcpn
Iliya Kwoji @IliyaKwoji
596 Followers 3K Following |PhD | Microbiome enthusiast |Multi-omics: Metagenomics, Transcriptomics, Proteomics and Metabolomics|
Akil Shetty @AkliftYt
19 Followers 60 Following \\Youtuber// I have not achieved anything significant yet but soon will.
Slovenian Microbiome .. @SloMicroNetwork
273 Followers 712 Following A collaborative initiative dedicated to advancing microbiome research in Slovenia and fostering connections with the global scientific community.
Ninad Mungi @ninad_mungi
915 Followers 727 Following Postdoc @BiochangeAU, IPBES fellow, (he/him) 🇮🇳 🇩🇰 Biodiversity, Biogeography, Bigdata
One Codex @OneCodex
791 Followers 315 Following Applied microbial genomics platform – say hi at [email protected]
Matthias Ebert @prof_ebert
363 Followers 96 Following Professor of Medicine and Gastroenterology, @Mannheim Faculty @UniHeidelberg
Gerry Tonkin-Hill @gerrythill
606 Followers 476 Following Group leader @PeterMacCC and @TheDohertyInst microbial genomics, statistics, machine learning
ISRO InSight @ISROSight
154K Followers 51 Following The ISRO InSight is a platform dedicated to providing updates, news, and insights about the ISRO. (Not affiliated with ISRO).
EMBLMicrobesTT @EmblMicrobesTT
414 Followers 250 Following Microbial Ecosystems Project from @embl Dissecting microbial functions and communities to understand how microbes interact with their environments.
DvS Research Group @VanSinderenLab
437 Followers 177 Following
Microbiome Research @SunagawaLab
2K Followers 407 Following Microbiome Research Lab at the Institute of @Microbio_ETH Zurich | Tweets by lab members
Lei Dai @leidai_CAS
323 Followers 173 Following Principal Investigator, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences
Jen Lu @JenniferLu717
237 Followers 39 Following Staff Scientist in Microbial Genomics Bioinformatics, Author of Bracken and Kraken (2).
Abraham @AbrahamGihawi
281 Followers 727 Following UEA Postdoc - Bioinformatics - Cancer (meta)genomics since 2017. Opinions are mine alone.
MTIG @MTIG_News
4K Followers 150 Following MTIG is dedicated to enhancing the regulatory, investment, and commercial environment to accelerate microbiome therapeutic drug product development.
CBDD (Chemical Biolog.. @UU_Glycoscience
283 Followers 399 Following Synthesis, chemical glycobiology, MedChem, host-microbe interaction, germinal center, RNA, post-translational modification… https://t.co/3rZU3TQP1K
Peter Bilak @PeterBilak
3K Followers 106 Following Founder @typotheque , co-founder @Fontstand and @TPTQarabic Ľ/ľ
David Pérez-Pascual @PerezPascualD
146 Followers 210 Following Senior Scientist Microbiology @Danone Research Passionate about #microbiology, #hostmicrobiota interactions, #bacterial crosstalk
Nextflow @nextflowio
5K Followers 30 Following The leading open source orchestrator for containerized, data-intensive pipelines on any infrastructure at any scale.
nf-core @nf_core
4K Followers 15 Following A community effort to collect a curated set of analysis pipelines built using Nextflow. Mastodon: @[email protected]
Oliver Schwengers �.. @oschwengers1
923 Followers 990 Following 🦠🧬🖥️ Microbial bioinformatics, WGS bacteria, plasmids, PostDoc @JLUGiessen, father of 2, husband, astrophotographer
World Food Programme @WFP
2.1M Followers 2K Following Laureate of the 2020 Nobel Peace Prize. 🇺🇳🌾🍛 The United Nations World Food Programme is the world's largest humanitarian agency working towards #ZeroHunger.
ESPGHAN @ESPGHANSociety
5K Followers 435 Following The European Society for Paediatric Gastroenterology, Hepatology and Nutrition - https://t.co/IWyRCiYtSI
Genomics Cow @GenomicsCow
3K Followers 69 Following Original and probably disagreeable perspectives on genomics. Not sure when I'm joking and when I'm being serious. Opinions my own, not the herd’s.
Nils Homer @nilshomer
6K Followers 747 Following I write software for Biologists. Founder @fulcrumgenomics, Bioinformatician, Computer Scientist, Coder, Father of 2xGirls. Opinions are my own.
Whenever there is "are you going back to India" conversation in our friend circle, 100% of the women are 100% convinced that they never want to go back. Europe spoils you with safety and freedom - which is super valuable for women coming from conservative communities.
Fantastic to have you at @WUR this week to join the @pigparadigm annual meeting
Extremely excited to be at @pigparadigm's Annual Meeting in Wageningen 🇳🇱! A cohort of @ucdavis swine faculty members & students will share their latest research surrounding the 4 pillars of the project including: data integration, host, nutrition, & microbiome. Stay tuned! 🐷
An hour of #bioinformatics can save a week in the lab. ALSO An hour in the lab can save a week of #bioinformatics.
Don’t miss out the poster by @oschwengers1 if you want to know the details of the great Bakta. We all want quick and accurate annotations 🙏 #ESCMIDGlobal2024 #ECCMID2024 #poster
A great way to start day 4 of #ESCMIDGlobal2024 with @torstenseemann, @oschwengers1, @AnitaSchurch & @TheBelsian speaking about empowering young #ClinicalMicrobiologists to integrate #Bioinformatic tools. Thank you speakers and those who attended for such an engaging session!
Galloping to gut health, butyrate producers and soil kebabs. New blog: Microbiome musings jakemrobinson.com/blog A round-up of interesting microbiome papers.
Great new study from @SFuentes_Micro and colleagues, presenting a promising model to study host-commensal-pathogen interaction, using cell cultures and human intestinal enteroids.
Our latest work on epithelial models! Or what happens when a wonderful technician wants to give a go at writing! 🙏🙌🏻 @iScience_CP Exploring Host-Commensal-Pathogen Dynamics in Cell Line and Organotypic Human Intestinal Epithelial Models: iScience cell.com/iscience/fullt…
If you have questions about using SemiBin, Small proteins and antimicrobial peptides, NGLess, the Global gene catalog (GMGC), or anything else metagenomics related, you can join our Open Office Hours First session in 30 minutes and the Zoom registration issue is fixed!
Open office hours in April/May April 24: qut.zoom.us/meeting/regist… May 9: qut.zoom.us/meeting/regist… Registration is free (but required to avoid spam)
Congratulations to the new #anaerobic #microbiology dr. Egas, for a well-defended PhD thesis! A @SIAMmicrobes very fruitful connector grant between @MIB_WUR @SousaDZ @SanchezAndreaI and @RIBESresearch @CUWelte All the best in the methanotroph future!
Our latest work on epithelial models! Or what happens when a wonderful technician wants to give a go at writing! 🙏🙌🏻 @iScience_CP Exploring Host-Commensal-Pathogen Dynamics in Cell Line and Organotypic Human Intestinal Epithelial Models: iScience cell.com/iscience/fullt…
Job Alert! Join our group as a postdoc @LUCID_LUMC to unravel the mysteries of tumor-microbiome interactions. For details, see lumc.nl/en/about-lumc/… or contact us directly!
Our group's latest paper is now online. Using phosphoflow, we show impaired responsiveness to IL-6 in part of our GCA patients. Moreover, these less responsive patients require longer glucocorticoid therapy. Link: authors.elsevier.com/sd/article/S08…
Are you a Bioinformatician and want to help us build a high throughput biodiversity monitoring research facility where we will process environmental DNA samples at large scale for our eDentity project Check out this vacancy! #Bioinformatician | Naturalis naturalis.nl/en/about-us/jo…
The chart is what is wrong with the article. In absolute %age, It overlooks billions of dollars of investment made by US, China, German govts, before industry stepped up its investment @Nature Govts need to have confidence in their academia, invest in them, industry will follow
This one chart shows how India can become a science powerhouse As the world’s largest election kicks off this week, India has an opportunity to reimagine science funding go.nature.com/4aDfGBm
📢 Dear colleagues working on human mobility modeling and prediction -- we are excited to announce a new open dataset of human mobility which contains city-scale, longitudinal, anonymized, 100,000 individual mobility trajectories. Scientific Data: nature.com/articles/s4159…
I keep an R package on GitHub with no code, with a DESCRIPTION that Imports the packages I always need. On any new R version, new VM, new laptop, I can `remotes::install("stephenturner/Tverse")` and get them all #rstats github.com/stephenturner/…
@StevenSalzberg1 @NCBI We had the same issue with a salamander genome. Luckily when we cut a scaffold in half it didn’t regenerate. biorxiv.org/content/10.110…
1. Where do superstar scientists come from? Other superstar scientists. Even when you control for everything resume-wise, protégés of soon-to-be-famous scientific mentors (orange) had way more future research impact than their IQ-matched peers (blue)
Bioinformatics Copilot 1.0: A Large Language Model-powered Software for the Analysis of Transcriptomic Data biorxiv.org/cgi/content/sh… #biorxiv_bioinfo
Culturing, culturing, and culturing of novel anaerobes! Finally accepted for publication. @VillanuevaLaury @NicoleBale3 @SIAMmicrobes @jcengelmann biorxiv.org/content/10.110…
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