Stephen B Montgomery @sbmontgom
Prof in Genetics, Biomedical Data Science and Pathology at Stanford. Amateur guitarist. Dad. 🇨🇦🧡 He/him montgomerylab.stanford.edu Stanford, CA Joined January 2011-
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Excited to share our preprint: Integration of transcriptomics and long-read genomics prioritizes structural variants in rare disease. medrxiv.org/content/10.110….
Tuesday brought me to Stanford University for another action-packed day! It started with Lloyd Minor, the Dean of the Stanford University School of Medicine. Then I got to meet with some fantastic genetics and genomics trainees!
Have you ever wondered how genome build is impacting your RNA-seq results? I am excited to share our new paper on medRxiv investigating the impact of hg19, hg38, and chm13 on six routinely-collected biospecimens: medrxiv.org/content/10.110… (1/8)
Can deep learning work on small data with far more features than samples? We present PLATO: a method that achieves the state-of-the-art on such datasets by using prior domain information! neurips.cc/virtual/2022/p… 🧵 Published in #NeurIPS2023 with @ren_hongyu @KexinHuang5 @jure
I am thrilled to present our new study out in @Nature where we measure aging at organ-level resolution in living people with large-scale plasma proteomics + ML! From @wysscoray lab, co-led with former grad student @JarodRutledge1 1/12
Hey - if you took my jacket from the coat check at the Pacbio party, give me an email. Your number was 756 mine was 758 ❤️. #ASHG23
Postdoctoral candidate search for our lab jobrxiv.org/job/stanford-2… Apply here tinyurl.com/hnzej33w
🚨 Job Alert 🚨 GREGoR @Stanford Site (GSS) is hiring a Bioinformatician! 💻🧬 Check out the job listing here: careersearch.stanford.edu/jobs/bioinform… #Bioinformatics #Computation #Genomics #STEMjobs
Bioinformatics Engineer wanted! Join #Stanford and the @GREGoR_research consortium #bioinformatics #raredisease Apply below👇
Bioinformatics Engineer wanted! Join #Stanford and the @GREGoR_research consortium #bioinformatics #raredisease Apply below👇
Hey #NSGC22 we’re hiring TWO research coordinators (genetic counselors would also be perfect fits!) bit.ly/UWCRDR-coord bit.ly/SeqFirst-coord to work with our team, researchers, clinicians, & families on some fun & exciting projects in #RareDisease genetics. Please RT!
🚨 Funding Deadline Approaching!🚨 Looking for #funding for your #research? Don't forget to get your LOI in by 12/2/22 for the @GREGoR_research Grant! No LOI required for the professional dev. and educational event grants, and all proposals due 1/13/23. Don't miss out!🧬💻🧪💰
🚨 Funding Deadline Approaching!🚨 Looking for #funding for your #research? Don't forget to get your LOI in by 12/2/22 for the @GREGoR_research Grant! No LOI required for the professional dev. and educational event grants, and all proposals due 1/13/23. Don't miss out!🧬💻🧪💰
First in a series of papers I've planned on Parkinsons disease. There are major gaps in our ability to monitor the underlying disease process. I hope our work moves the needle towards better treatments.
First in a series of papers I've planned on Parkinsons disease. There are major gaps in our ability to monitor the underlying disease process. I hope our work moves the needle towards better treatments.
If he wants to make money from academics, just make it pay to post.
RT one more time. Application deadline is in < 2 weeks.
Come join our Human Genetics faculty at UCLA! recruit.apo.ucla.edu/JPF07879
🚨 We are hiring 2-3 more faculty @arcinstitute to join our current team of 4 Arc Core Investigators, who also hold faculty appointments at our partner universities @Stanford @UCBerkeley @UCSF. Your lab at Arc HQ will be fully funded for up to 20 people arcinstitute.org/jobs/faculty-a…
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5K Followers 2K Following Assistant Professor of Biology at Howard University studying functional & evolutionary morphology. she/they #BlackLivesMatterExcited to share our preprint: Integration of transcriptomics and long-read genomics prioritizes structural variants in rare disease. medrxiv.org/content/10.110….
I also gave a seminar on creating the fourth chapter of genomics to a very enthusiastic audience, and I ended the day by having dinner with the great Stanford genomics faculty. Thank you all for making me feel so welcome!
Tuesday brought me to Stanford University for another action-packed day! It started with Lloyd Minor, the Dean of the Stanford University School of Medicine. Then I got to meet with some fantastic genetics and genomics trainees!
Can deep learning work on small data with far more features than samples? We present PLATO: a method that achieves the state-of-the-art on such datasets by using prior domain information! neurips.cc/virtual/2022/p… 🧵 Published in #NeurIPS2023 with @ren_hongyu @KexinHuang5 @jure
"Rare penetrant mutations confer severe risk of common diseases" medrxiv.org/content/10.110…
Great postdoc advisor! 100% recommended :)
Postdoctoral candidate search for our lab jobrxiv.org/job/stanford-2… Apply here tinyurl.com/hnzej33w
🚨 Job Alert 🚨 GREGoR @Stanford Site (GSS) is hiring a Bioinformatician! 💻🧬 Check out the job listing here: careersearch.stanford.edu/jobs/bioinform… #Bioinformatics #Computation #Genomics #STEMjobs
@minouye271 @pathogenomenick blocked and reported
@sbmontgom @SyabiraBakes Wonderful stuff Syabira, and huge congrats!! Hopefully comp bio can continue to stay interesting/rewarding as your 2nd career takes off :)
Spoiler alert ‼️ Y'all a computational biologist (Syabira Yusoff, PhD) just won the Great British Bake Off dailymail.co.uk/femail/article… LinkedIn 👉 uk.linkedin.com/in/syabira-yus…
@ClementYChow 'start' sharing unpopular, cancelable opinions?! You mean there is more?
@ceclindgren @GenSocUK Congratulations! They couldn't have picked a better scientist and person!
@ceclindgren @GenSocUK Congratulations!! This is so well deserved! You’re an inspiration to all of us 💫🎉
I am grateful to @cshlcourses for the generous plaque and for the opportunity to teach so many fantastic students over the years.
I am so very proud to have been awarded the 2023 Mary Lyon Medal by the @GenSocUK ✨
Congratulations to Prof Cecilia Lindgren @ceclindgren, director of @bdi_oxford, the winner of our Mary Lyon Medal for her research dissecting the genetic landscape of common complex diseases. #awards #genetics genetics.org.uk/medals-and-pri…
For context there are zero approved treatments before today that alter the trajectory of type 1 diabetes. A new era begins. Hoping we can move from ‘delay’ to ‘stop’ type 1 diabetes. This also points to the need for better screening and tracking of those at risk.
We had a fantastic guest lecture and practical on long read diagnosis of rare disease today from @danrdanny at #seqtec2022 today. Cutting edge diagnostics and great teaching examples!