Tung Trinh @tungstrinh
Young scientist tries exploring the world. Researcher at Oxford University Clinical Research Unit - OUCRU. Edinburgh, Scotland Joined January 2018-
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Autocycler: long-read consensus assembly for bacterial genomes biorxiv.org/content/10.110… 🧬🖥️🧪 github.com/rrwick/Autocyc…
After over 3 years of negotiations, WHO Member States have finalized a draft #PandemicAccord to make the world safer from future pandemics. The draft agreement will now be submitted to WHO’s Member States meeting at the #WHA78 for consideration and adoption Proposals within the…
Today marks the beginning of OpenRxiv, which replaces bioRxiv and medRxiv, the world's largest preprint platform for life and medical science @openrxiv
🦘✂️ Thanks to @cziscience, @wytamma and I are writing the next version of the Snippy bacterial variant calling pipeline. We want your input on what features s it will have. Please fill out this (longish) survey to help make Snippy great again! forms.gle/YJP6WQjsk8KKQx…
📣Introducing the Multiple Comparative Genome Viewer (MCGV)! While our existing Comparative Genome Viewer (CGV) allows you to compare pairs of eukaryotic assemblies, the new MCGV tool helps you analyze multiple assemblies in a single view. More: ow.ly/PnPg50UHIBp #NCBICGR
Clinical AMR training at @KEMRI_Wellcome with participants from Kenya, Nigeria, Ghana, Malawi, Indonesia, Nepal, Cambodia, Vietnam & Laos. DNA extraction & Illumina sequencing yesterday, Nanopore & computational practicals next. Great Asia-Africa partnership through @ACORN_AMR
🔴 LIVE UPDATE: #RECOVERYTrial has revolutionised the way we research #InfectiousDiseases. We're excited to host the first #RECOVERYMeeting2024 in Nepal to discuss its impact & future directions! @NDMOxford @Oxford_NDPH @OUCRUID @PSIOxford @wellcometrust
First step in a community project to provide a uniformly assembled, annotated and searchable set of bacterial genomes, our preprint on our initial release of 1.9 million genome assemblies+taxonomic estimates. (figure compares with previous 661k dataset) biorxiv.org/content/10.110…
Bactopia now supports AllTheBacteria assemblies! 🎉 If you are planning secondary analyses, this feature allows you to seamlessly use Bactopia. To demonstrate this, here's a blog post using Bactopia to analyze 5400 L. pneumophila assemblies bactopia.github.io/latest/blog/20…
Bactopia now supports AllTheBacteria assemblies! 🎉 If you are planning secondary analyses, this feature allows you to seamlessly use Bactopia. To demonstrate this, here's a blog post using Bactopia to analyze 5400 L. pneumophila assemblies bactopia.github.io/latest/blog/20…
OUCRU Hanoi is going blue for #AMR Awareness! This World Antimicrobial Resistance Awareness Week, let's unite in the global fight against AMR. Learn more about our work in this field: ow.ly/Lxtp50Q9iYI @hrogier @HuongVuThiLan @TKesteman #AMR #GlobalHealth
#AMR is a top 10 global threat to public health, causing significant challenges for disease prevention & treatment. Join us during #WorldAMRAwarenessWeek to learn about OUCRU's research to enhance antibiotic use #AMU in Southeast Asia #WAAW
Our new randomised controlled trial published in @TheLancet found that point-of-care testing can reduce prescription of antibiotics without compromising patient recovery, suggesting an effective strategy to combat #AntimicrobialResistance 👉ow.ly/9tP250OBrPq
Went searching for @theosanderson's codon2nucleotide.theo.io today for a quick look up of SARS-CoV-2 amino acid to nucleotide position. Re-posting here because it's such a handy little tool, I'm keeping it pinned in my browser! 🤩
A easier and faster way to do phylodynamic.
A new R package to estimate population (and epidemiological) dynamics from (pathogens) genomic sequences: cran.r-project.org/web/packages/T…
I'm not an immunologist, but I've been trying to read into the literature on waning immunity to SARS-CoV-2 and to understand the recent NIH, CDC, FDA booster recommendation (hhs.gov/about/news/202…). I'll share some takeaways here. 1/14
NEW: UK #COVID19 paper from @PHE_uk @MRC_BSU on Delta severity now published Delta associated with increased risk of hospitalisation vs Alpha BUT - when stratified by vaccination status - only unvaccinated had significantly higher risk A closer look🧵 thelancet.com/journals/lanin…
The 2nd preprint from G2P-Japan is out at @biorxivpreprint ! We revealed that the SARS-CoV-2 delta variant (B.1.617.2 lineage) is highly fusogenic and #P681R mutation, a hallmark in the B.1.617 lineage, is its determinant. Please retweet 1/3 biorxiv.org/content/10.110…
GISAID surpassed 2 million #SARSCoV2 sequences. A historical moment for the ID & molecular epidemiology fields. Sequencing more especially from developing & lowest vaxxed countries will help understanding more about the virus diversity & contain new VOCs before global spread.
📣📣Want to learn how to analyse #COVID19 genome data? Our joint workshop with @NetworkArtic is here again! ⬇Register now⬇ forms.gle/bV1qYBaopEyUsj…

Isabela Malta @belamalta10
824 Followers 593 Following From 🇧🇷. Helping to deliver training in genomics & bioinformatics in Africa, Asia & Latin America. Producer & researcher of @mentor_podcast. Also, @SagesaAmr
Quan Ton Ngoc Minh @quanntnm
80 Followers 1K Following currently working on human microbiome, using @nextflowio to create scalable and reproducible pipelines
Trang Hau, Ph.D. @Trang_Hau1610
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leonmarigi @LeonMarigi
322 Followers 549 Following Biochemist | Bioinformatician | Molecular Biologist | Alumni of @IDeAL_KEMRI_WT MSc. Fellow 2016 based at @KEMRI_Wellcome | car enthusiast 🏎️
Teyso @Teyso231208
33 Followers 366 Following Bạn như một luồng gió , Ko ai có thể làm được , Chỉ muốn niềm vui
Tishaythea @tishaythea18493
62 Followers 874 Following Nguyện anh có bóng cây để nương tựa có rượu để say xỉn
Miles Benton @miles_benton
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ngo phuong @ngophuong85
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ESWI @ESWInfluenza
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CLIMB-BIG-DATA @MRCClimb
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Maria Martínez @MariaCordoba92
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Dave Baker @tweakyaustin
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Stefano Calamanti @stefano_calavet
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HUBPasteur @HubPasteur
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Kien Trinh @RitzTrinh
24 Followers 303 Following A System Administrator , I like to learn new technology
Phil Ashton @flashton2003
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Nabil-Fareed Alikhan ... @happy_khan
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ISRV_Epi_Group @IsirvEpi
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Alacol @alaincoletta
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Za' @Jayzapmz
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40:40 Recruitment @4040rec
560 Followers 5K Following Specialist Recruitment Partner - Pharmaceutical & Healthcare arena #pharmaceutical #healthcare #medicaldevices #4040rec #medicalsales #marketresearch #uk
Kyvor Genomics @KyvorGenomics
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Anna Jeromski @AnnaJeromski
861 Followers 4K Following My mission is to find the line between not enough coffee and too much coffee.Geeky about everything NASA and Space. 🛰🌌🔭 #nasa #space #mars #linux
SD Gundam G Generatio... @ggene_eternalEN
47K Followers 1 Following Official account for mobile game “SD Gundam G Generation ETERNAL”! Get updates & join campaigns! https://t.co/LyYEoeyJiG #GundamEternal
The Global Health Net... @info_TGHN
9K Followers 2K Following The digital platform for sharing and accessing health research training, tools, resources, peer support and collaborative opportunities.
Julio Diaz Caballero @juliofdiaz
211 Followers 188 Following he/him | Microbial Genomics & Data Science aficionado.
Isabela Malta @belamalta10
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Eric Topol @EricTopol
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Ryan Wick @rrwick
3K Followers 389 Following No longer active here. Find me on Bluesky: https://t.co/1mPtWVlnli
Oliver Schwengers �... @oschwengers1
924 Followers 539 Following 🦠🧬🖥️ Microbial bioinformatics, WGS bacteria, plasmids, PostDoc @JLUGiessen, father of 2, husband, astrophotographer
Trang Hau, Ph.D. @Trang_Hau1610
16 Followers 148 Following #MedicalScience | #VirusHostInteraction #InfectionDisease | #Immunology Researcher @ AIDS Research Center, NIID, Japan
Bacterial Genomics @BactGenRSS
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Chris Seymour @iiSeymour
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Theiagen Genomics @theiagen
516 Followers 69 Following Transforming public health and infectious disease surveillance through the innovative implementation of #NGS and #bioinformatics technologies.
QIIME 2 @qiime2
3K Followers 0 Following Announcements, tech support, community & discussion can always be found on the QIIME 2 Forum (https://t.co/U2iHan1zR9).
MPXV Lineages @mpxv_lineages
337 Followers 0 Following Open scientific collaboration to designate monkeypox virus lineages
David A. Rasmussen @davorasmussen
884 Followers 666 Following Infectious disease biologist at NCSU. Computational Evolution / Epi / Virology. "Only the little wren, worthless and unlovely, is free"
GenSpectrum @GenSpectrum
1K Followers 21 Following We develop open web APIs and dashboards for genomic epidemiology. Monkeypox - https://t.co/ehHkFkSaKl and SARS-CoV-2 - https://t.co/feDGaT1cNx
Le Thanh Hoang Nhat @LeThanhHoangNh1
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Tulio de Oliveira @Tuliodna
58K Followers 652 Following Professor of medical research leading global genomics surveillance. Director CERI and KRISP, SA and Deputy Director GSU, Sanger Institute, UK. Tweets my own.
ENA-CoV-Stats @EnaCov
53 Followers 0 Following I'm a bot, incapable of love or replying to tweets. Delivering updates on SARS-CoV-2 stats from https://t.co/Ua77JlOjhK everyday at 2pm GMT
scikit-learn @scikit_learn
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Peter van Heusden (he... @pvanheus
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ProMED @ProMED_mail
26K Followers 179 Following @ISID_org's ProMED is the oldest existing event-based surveillance network, reporting on infectious diseases using a One Health approach. 🦠
DiseaseOutbreak @DiseaseOutbreak
896 Followers 33 Following Tweets from https://t.co/YwsWk66yst - a resource to increase #FAIRness of info on #COVID19 and SARS-CoV-2 variants from the Su, Wu, and Andersen labs at Scripps Research
Hao Chung The @HaoChungThe1
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Michael Chew @MichaelWKChew
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Thu Tran @athutran
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Martin Landray @MartinLandray
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mishkendall @mishkendall
977 Followers 509 Following Maths / statistician working in epidemiology and phylogenetics @warwickstats and @UKHSA. Mainly focused on @NHSCOVID19app since early 2020. Also on bsky.
Virological Posts @virological_org
5K Followers 0 Following A bot tweeting new posts from the https://t.co/Na52gjaiN2 discussion forum for molecular evolution and epidemiology of viruses. Maintained by @noamross
Our World in Data @OurWorldInData
299K Followers 22 Following Research and data to make progress against the world’s largest problems. Based out of @UniOfOxford, founded by @MaxCRoser.
Retraction Watch @RetractionWatch
91K Followers 20 Following Daily newsletter https://t.co/T4dNEAd2zy Database https://t.co/Wx3LmYCtGk Tips [email protected] (better than @ replies) Donate https://t.co/qh4sIBw1uU
Epidemic diseases Res... @ERGO_Horby
593 Followers 308 Following Patients are at the heart of every outbreak. Follow us for updates on our clinical research projects on emerging and epidemic infections.
M Rabaa @maladjustoid
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CDC @CDCgov
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The Sato Lab (Kei Sat... @SystemsVirology
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COVID-19 Genomics UK ... @CovidGenomicsUK
16K Followers 387 Following *This account is no longer active or monitored.* A UK-wide collaborative network for SARS-CoV-2 genomics, research, and training with @COG_Train.
GISAID Initiative @GISAID
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Nextstrain @nextstrain
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Carl T. Bergstrom @CT_Bergstrom
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Prof. Akiko Iwasaki @VirusesImmunity
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Institut Pasteur, sin... @institutpasteur
65K Followers 2K Following Nous avons quitté X pour Bluesky : https://t.co/wz98kKt3GY Restons connectés pour une science libre et éclairée. 🌐