Marius Pachitariu @[email protected] @marius10p
running a lab @HHMIJanelia, data (neuro) scientist, visual cortex, large-scale recordings #Kilosort, #Suite2p, #Cellpose mouseland.github.io Janelia Research Campus Joined December 2011-
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Data from 56 different species sheds light on the diversity and evolution of cerebellar folding in mammals. elifesciences.org/articles/85907…
Out yesterday from the Singh and Carpenter labs! The CPJUMP1 Resource comprises Cell Painting images and profiles of 75 million cells treated with hundreds of chemical and genetic perturbations. nature.com/articles/s4159…
The latest version of the spike-sorting algorithm #kilosort (Kilosort4) is now out. Check out its improved performance compared to previous versions, owing to the use of a graph-based clustering approach. @marius10p @computingnature @HHMIJanelia nature.com/articles/s4159…
The Kilosort4 paper is now published @naturemethods. We put a lot of work into building and properly documenting all things Kilosort (including for older versions). w/ @computingnature #kilosort paper: nature.com/articles/s4159… code: github.com/MouseLand/Kilo…
Janelia Group Leaders @marius10p & @computingnature have released Kilosort4, the newest version of the spike-sorting software that enables scientists to understand the mountains of data collected from recording the simultaneous activity of 100s of neurons. janelia.org/news/janelia-s…
There is a lot of hype right now about Transfomers. I had assumed they were a breakthrough, but some of the early work was exaggerated and in a fair fight the metrics would be closer. This preprint suggests that in a fair fight Cellpose still wins. biorxiv.org/content/10.110…
@redklavier However, we recommend our "super-generalist" cyto3 model as it has been trained on more datasets from even more imaging modalities (github.com/MouseLand/cell…)
#Cellpose remains the state-of-the-art for cellular segmentation. See our new paper, in response to Ma et al, Nat Methods 2024. Paper: biorxiv.org/content/10.110… Leaderboard results ⬇️⬇️⬇️
🔬 Calling all #bioimageanalysis pros and fans! Seeking unique #cellpose application use cases for my computer vision students. Got any fascinating examples to share? Let's play "Will it cellpose?" Excited to see your unusual submissions! 😁 Please share on!
Excited to share that our paper on sound-evoked facial movements in mice is now out in Current Biology: authors.elsevier.com/a/1im623QW8S6D… A couple of summaries for different crowds below:
This is cool.
Today we are sharing our most complex #assembloid to date: a 4-part model of the human ascending neural somatosensory pathway generated by functionally integrating stem cell-derived cerebral cortical, thalamic, spinal and sensory #organoids. Check out the @biorxivpreprint and…
Join us for another year of the Neuromatch Academy!
Join us for another year of the Neuromatch Academy!
Happy International Women’s Day to all my fearless brilliant women and non-binary fellow scientists cracking that glass ceiling a little more every day!
I found the main bug and fixed it (see new releases). This affects versions 2.5 and 3. Thanks to the @IntlBrainLab for finding this problem. Good time to upgrade to Kilosort4 :) ? The #pytorch implementation should be immune from such issues. #kilosort github.com/MouseLand/Kilo…
I found the main bug and fixed it (see new releases). This affects versions 2.5 and 3. Thanks to the @IntlBrainLab for finding this problem. Good time to upgrade to Kilosort4 :) ? The #pytorch implementation should be immune from such issues. #kilosort github.com/MouseLand/Kilo… https://t.co/wUkZBKTHOq
Excited to launch the new @neuromatch NeuroAI course this summer! This is our first advanced course on the shared principles of intelligence in artificial and natural systems. Applications are open until March 17th (for TAs) and March 24th (for students). neuroai.science/p/unveiling-th…
Today at #Cosyne24 @kaymtye gave a historic talk on Evolving a Toxic Hierarchy into a Sustainable Ecosystem We applaud her & you for your bravery 👏 the DEIA Committee @lukesjulson H.O. @denisejcai S.M. F.A. M.L. for spearheading & the lunch afterwards to discuss paths forward!
Kilosort4 is now fully released in #python and we have a new logo! github.com/MouseLand/Kilo… w/ Shashwat Sridhar, Jacob Pennington and @computingnature. #kilosort
Check out our lab’s recent work on visual learning and representations at the #cosyne24 #cosyne2024 workshops:
Check out our lab’s recent work on visual learning and representations at the #cosyne24 #cosyne2024 workshops: https://t.co/4FE8p5CpT3
Add these workshop sessions to your agenda to see recent work from the Pachitariu-Stringer lab at #cosyne24: whova.com/portal/webapp/… whova.com/portal/webapp/… whova.com/portal/webapp/… Work by @NunezKant , @Lin_Zhong_ion , @FarahDu6 and @computingnature.
Kording —-& Lab �.. @KordingLab
42K Followers 4K Following Konrad kording, @Penn Prof, deep learning, brains, #causality, rigor, https://t.co/tTJW05RjpC, https://t.co/qf7ZHxiCUt, Transdisciplinary optimist, Dad, Loves outdoors, 🦖
Kanaka Rajan @KanakaRajanPhD
10K Followers 2K Following Associate Professor at Harvard & Kempner Institute. Applying computational frameworks & ML to decode multi-scale neural processes. Marathoner. Rescue dog mom.
Patrick Mineault @patrickmineault
19K Followers 3K Following Neuro AI, vision, Python, open science. Senior ML scientist @ Mila. Previously engineer @ Google, Meta. Updates from https://t.co/d0o7cSLC6o, https://t.co/duh0cFwLyw
Tony Zador @TonyZador
11K Followers 2K Following Neuroscientist at CSHL. Interests: neuroAI, molecular connectomics, & cortical circuits underlying decisions. Co-founder of Cosyne and NAISys meetings.
Ann Kennedy @Antihebbiann
3K Followers 349 Following Theory of brains and behavior | Assistant Professor at @NUFeinbergMed
Adam J Calhoun @neuroecology
19K Followers 1K Following I can't imagine smells. Neuro, ecology, behavior, punctuation art. Now: @Meta @RealityLabs, ML for neural interfaces. Prev: @Princeton @SalkInstitute @Intel
Prof Aman Saleem (@am.. @Aman_sal
2K Followers 948 Following Neuroscientist tangled in sight & space. Professor at UCL, London. (he/him) https://t.co/8823hopOx8 Follow me on Mastodon: https://t.co/gDCBruBbGI
Dan Levenstein @dlevenstein
3K Followers 1K Following Neuroscientist, in theory. Studying sleep in 🧠s and 💻s with @tyrell_turing and @apeyrache at Mila/McGill
Shahab Bakhtiari @ShahabBakht
3K Followers 1K Following || assistant prof @UMontreal || leading the systems neuroscience and AI lab (SNAIL) || @Mila_Quebec || #NeuroAI || vision and learning in brains and machines
Allen Institute @AllenInstitute
64K Followers 3K Following The Allen Institute is committed to solving mysteries of bioscience — researching the unknown of human biology, in the brain, the cell and the immune system.
Andrew Pruszynski @andpru
11K Followers 3K Following Associate Professor, @westernuPandP. Co-director, https://t.co/f66WHJ2pgV. Co-director, @wusmsl. Comments my own.
Nicole C Rust, PhD @NicoleCRust
7K Followers 890 Following Professor @Penn. Memory scientist. Advocate of community-based progress. Writing a book about brain research. What do we want to know?
Blake Richards @tyrell_turing
15K Followers 2K Following Researcher at @mcgillu combining AI and neuroscience. Also on Bluesky (@tyrellturing.bsky.social) and Mastodon: @[email protected].
HHMI | Janelia @HHMIJanelia
27K Followers 508 Following Janelia is a pioneering research center where scientists from many disciplines gather to collaborate on some of science's most challenging problems.
Dan O'Shea @djoshea
2K Followers 1K Following I study how the brain controls movement and establishes dexterity. Neuroscientist and Engineer @Stanford in the Neural Prosthetics Systems Lab @[email protected]
Vijay Mohan K Nambood.. @vijay_mkn
2K Followers 597 Following Asst Prof in Neurology (AARG) at UCSF Previously postdoc in Stuber lab at UW and UNC; PhD from Shuler lab at Johns Hopkins
Ida Momennejad @criticalneuro
15K Followers 2K Following Principal Researcher @MSFTResearch. I study memory/planning in brains. I build/evaluate AI. Writing on Memory. Finishing a novel. Cohost https://t.co/rgvLjhBvSH
Adrien Peyrache 🪐�.. @apeyrache
4K Followers 839 Following Space, Sleep, and Spikes. @McGillU @TheNeuro_MNI.
Soumyajit Bose @Soumyaj15209314
3K Followers 2K Following Crunching football numbers at a special place.
utilisateurs 56 @TLH_65
0 Followers 14 Following
Fangyu Lin @FangyuL46480611
1 Followers 11 Following
yolo @yolo39759609
0 Followers 13 Following
Atri Ghosh @1atrizx
79 Followers 666 Following Previously Auditory NeuroSc RA @ChariteBerlin Cognitive Science @iitgn Engineer
Nao Okabe @Nao__Okabe
27 Followers 105 Following Neuroscientist @UCLA, brain repair, motor learning, 2 photon microscope, EEG
Amit kumar @amit_iiserk
81 Followers 173 Following System neuroscientist @labSchmitz, studying learning and inheritance of learning abilities
Carolina Soares @C_FonsecaSoares
395 Followers 2K Following Neuroscience PhD candidate @kingscollegelon 🧠Science & Philosophy enthusiast 🇵🇹 Podcast co-founder @Neuroverse_pod
Nuria Vendrell Llopis @VendrellLlopis
159 Followers 351 Following Passionate neuroscientist & neuroengineer unraveling the neural mechanisms of learning and enhancing neuroprosthetics through optogenetics. Asst Prof at UAB
kiss love @reyteesatg44037
57 Followers 527 Following
高乐 @gaole54959076
0 Followers 63 Following
Davide Talamonti @DavidTalamonti
34 Followers 234 Following
Eleni Moysiadou @EleniMoysiadou
24 Followers 153 Following Research engineer at @KaralisLab @InstitutCerveau
Sammy Hansali @crearmentes
39 Followers 205 Following Postbac | Researching bioelectricity @ The Levin Lab, Tufts University Interested in building multi-modal foundation models for biology
Robert Murcko 🧠 �.. @RobertMurcko
36 Followers 70 Following Founder at Dynamic Neurotech (@DynamicNeuro)
Srihita Rudraraju @sri_rudrar
78 Followers 129 Following Psych PhD student @UCSD. Gentner Lab. Comp. neuroscience, machine learning, perception, animal cognition, sounds 🧠💻. she/her 🏳️🌈
rhymes baddie @BaddieRhymes
85 Followers 384 Following
Jennifer Lee @k_jennifer_lee
17 Followers 61 Following Sr Lab specialist @fergilmills lab at University of Utah Department of Neurobiology | she/her
F. Rettore Andreis @Felipe_RAndreis
138 Followers 235 Following Postdoctoral Fellow at @CNAP_AAU @aausund
Yu Yong @yu_yong_
1 Followers 60 Following
Mvy @ryhtriytol21286
74 Followers 613 Following
Tanmay Rastogi @TanmayRastogi07
130 Followers 834 Following 👨🎓 Neuroscience student. Interested in psychedelics and philosophy. My tweets are mental notes.
Xinyue Ma @XinyueMa_neuro
34 Followers 134 Following PhD student in Computational Neuroscience 🧠 @mcgillu.
Mariam Hassan @maraxhass
2K Followers 999 Following Software Engineer For Brain-Computer Interfaces. Computation, Cognitive Architectures, Artificial Intelligence, and Biotechnology. Humans X Artificial Agents
Ruiyang He @he_ruiyang
27 Followers 201 Following PhD Student @ColumbiaBME and @nygenome, B.A. + M.Sci @Cambridge_Uni. Interested in computational methods for single-cell and spatial omics.
ppfeiffer @ppfeiffer1
72 Followers 246 Following living in berlin | working in neuroscience | passion for beach volleyball, running, my kiez and travelling
Claudio @novadduni
26 Followers 55 Following
Hansol Lim @HansolLim1
290 Followers 496 Following master from @mpiBrain and now PhD candidate @mpiforbi @IMPRS_LS ❤️ BLA(valence & social &metabolic) searching for next journey ! curiosity guides me !
Reena.Lasrado @lasradr
190 Followers 2K Following
Christa Michel @christaneuro
52 Followers 248 Following incoming PhD student in systems neuroscience | past @BostonCollege, present @MGHMartinos, future @cmuneurosci (she/her)
Matthew Baker @MatthewBaker_
528 Followers 2K Following Ph.D. ● Systems Neuroscientist, Neuromodulation 🧠 Cybernetics and Motor Physiology Lab Postdoc @ Mayo Clinic - views are my own
Rubab Talpur @rtalpur
134 Followers 513 Following In a world where you can be anything, be kind (anon).Let us all respect the invisible labels. A neuroscientist in making. Views are my own.
pollytur @pollytur1
90 Followers 494 Following PhD student at @alxecker lab. DL engineer, toddler neuroscientist, topology enthusiast. Open to any neuroscience internship/collaboration. | STOP THE WAR
Joaquín Amigó Vega @jamigov
90 Followers 303 Following Automation Engineer & Computer Science PhD student @GSSI_LAQUILA working with machine learning and speech BCIs
Luke Remage-Healey @HealeyLab
1K Followers 1K Following @UMassAmherst, Professor, Neuroscience and Behavior, Center for Neuroendocrine Studies. #BlackLivesMatter
kitakuriya315 @talon1402003
58 Followers 236 Following 2022年4月～滋賀県彦根市に地方移住/海上自衛隊で艦艇乗り→AIエンジニアを目指して退職→地理情報系AIの会社でエンジニア→業務委託、副業案件探し中/KaggleとSolafune取り組み中/AI・データサイエンス系の方、フォローしてます/釣り好き魚好き/元熱狂的中日ファン
Simona Lodato @LodatoS_Lab
1K Followers 2K Following in love with the brain and its ways to come about. proud mom of two boys. opinions are mine.
Peng Jiang @jiangp21
23 Followers 359 Following Computional Neuroscience, PhD in Tsinghua University @Tsinghua_Uni Interested in multitask learning, neural representation, task compositionally, brain&RNN&LLM
Kenichiro Nagahama @k_hammer_1001
903 Followers 909 Following Postdoc (Kwon Lab) @HopkinsNeuro←PhD.@UTokyo_News_en←M.D.@ NMS. Neuroscience; Sociality; Biological Psychiatry; Tool Development.
Take @Take32812968
0 Followers 504 Following
Tyler Ekins @tyler_ekins
252 Followers 391 Following Postdoc at University of Michigan studying psychedelic neurophysiology
Dr. Nancy Mack @neuronanc2
625 Followers 1K Following Neuroscience postdoc @PrincetonNeuro with Annegret Falkner | @NIMH Brain Initiative fellow | Interested in social choices & emotions she/her
Lu Lu, MD, PhD @Lu_Lu_magic
55 Followers 274 Following Mechanisms underlying fragile x syndrome, AD, ALS, spinal cord injury using ips
Brittney Boublil, PhD @brittneyboublil
326 Followers 469 Following Postdoc at @UCIrvine @AnatomyNeurobio @UCI_EpiCenter 🧠 | PhD in Psychological and Brain Sciences @JohnsHopkins ‘21 🦇 | BS in Human Biology @UCSD ‘13
Adrien Causse @a_causse
73 Followers 249 Following PhD candidate in Clinical Neuroscience - Dupret group @UniofOxford @MRCBNDU | Double cursus médecine-science @ENSdeLyon - Ecole de l'@Inserm Liliane Bettencourt
Kording —-& Lab �.. @KordingLab
42K Followers 4K Following Konrad kording, @Penn Prof, deep learning, brains, #causality, rigor, https://t.co/tTJW05RjpC, https://t.co/qf7ZHxiCUt, Transdisciplinary optimist, Dad, Loves outdoors, 🦖
Kanaka Rajan @KanakaRajanPhD
10K Followers 2K Following Associate Professor at Harvard & Kempner Institute. Applying computational frameworks & ML to decode multi-scale neural processes. Marathoner. Rescue dog mom.
Kay M Tye PhD @kaymtye
32K Followers 993 Following Mom. Neuroscientist. She/Her. BLM. https://t.co/sN3wqA9sHH https://t.co/GgqdGIyJwi
Patrick Mineault @patrickmineault
19K Followers 3K Following Neuro AI, vision, Python, open science. Senior ML scientist @ Mila. Previously engineer @ Google, Meta. Updates from https://t.co/d0o7cSLC6o, https://t.co/duh0cFwLyw
Nature Neuroscience @NatureNeuro
407K Followers 268 Following News, commentary and research coverage from the international monthly journal publishing the highest quality of work in all areas of neuroscience.
Mackenzie Mathis, PhD @TrackingActions
20K Followers 12 Following Scientist merging adaptive motor control & machine learning | 🐭@deeplabcut 🦓@cebraAI | @ELLISforEurope Scholar | (same @ on bluesky)
Tony Zador @TonyZador
11K Followers 2K Following Neuroscientist at CSHL. Interests: neuroAI, molecular connectomics, & cortical circuits underlying decisions. Co-founder of Cosyne and NAISys meetings.
Ann Kennedy @Antihebbiann
3K Followers 349 Following Theory of brains and behavior | Assistant Professor at @NUFeinbergMed
Dan Goodman @neuralreckoning
12K Followers 614 Following Computational neuroscientist @imperialcollege. I like to make stuff: @briansimulator @neuromatch. 🐘 @[email protected]
Prof Aman Saleem (@am.. @Aman_sal
2K Followers 948 Following Neuroscientist tangled in sight & space. Professor at UCL, London. (he/him) https://t.co/8823hopOx8 Follow me on Mastodon: https://t.co/gDCBruBbGI
Allen Institute @AllenInstitute
64K Followers 3K Following The Allen Institute is committed to solving mysteries of bioscience — researching the unknown of human biology, in the brain, the cell and the immune system.
Nicole C Rust, PhD @NicoleCRust
7K Followers 890 Following Professor @Penn. Memory scientist. Advocate of community-based progress. Writing a book about brain research. What do we want to know?
Blake Richards @tyrell_turing
15K Followers 2K Following Researcher at @mcgillu combining AI and neuroscience. Also on Bluesky (@tyrellturing.bsky.social) and Mastodon: @[email protected].
HHMI | Janelia @HHMIJanelia
27K Followers 508 Following Janelia is a pioneering research center where scientists from many disciplines gather to collaborate on some of science's most challenging problems.
Dan O'Shea @djoshea
2K Followers 1K Following I study how the brain controls movement and establishes dexterity. Neuroscientist and Engineer @Stanford in the Neural Prosthetics Systems Lab @[email protected]
Vijay Mohan K Nambood.. @vijay_mkn
2K Followers 597 Following Asst Prof in Neurology (AARG) at UCSF Previously postdoc in Stuber lab at UW and UNC; PhD from Shuler lab at Johns Hopkins
Ida Momennejad @criticalneuro
15K Followers 2K Following Principal Researcher @MSFTResearch. I study memory/planning in brains. I build/evaluate AI. Writing on Memory. Finishing a novel. Cohost https://t.co/rgvLjhBvSH
Adrien Peyrache 🪐�.. @apeyrache
4K Followers 839 Following Space, Sleep, and Spikes. @McGillU @TheNeuro_MNI.
David DiGregorio @DDiGrego_Neuro
1K Followers 546 Following Professor and Chair at CU Anschutz Medical Center. Group Leader at Institut Pasteur. The laboratory studies the synaptic basis of neural circuit function
Lee Mordechai @LeeMordechai
14K Followers 95 Following Assistant Prof. at @HebrewU. Work on Byzantine history, environmental history, the Justinianic Plague and the 536 event. Opinions are my own.
Alison Tebo @agtebo
1K Followers 410 Following 🏳️🌈🧬🔬 chemical-genetic microscopy tools, protein engineering, Group Leader @HHMIJanelia, Black Lives Matter, she/they
Anca M. Pasca, MD @NeoPascaLab
317 Followers 761 Following Neonatologist and scientist using organoids to study neonatal brain development and injury with the goal of identifying effective therapeutics. Views are mine
Stoyo Karamihalev @stoyo_k
345 Followers 769 Following Neuroscientist in the Gogolla lab at the Max Planck Institute of Psychiatry. Looking for emotions in the brain.
Xuyu Qian @QianXuyu
773 Followers 718 Following NINDS K99/R00 Fellow in @ChrisAWalsh1 lab at @BostonChildrens/@harvardmed. PhD @HopkinsMedicine. HHWF-HHMI Fellow @ForbesUnder30 Science. el psy congroo.
Joao Pereira @jdpereira
6K Followers 5K Following Interested in neurodegeneration, deep learning, organoids and iPSCs! Also mentoring and science careers! Scientific Director iPSC NeuroCore Yale University
Brian Northan @truenorth_ia
502 Followers 865 Following Systems design engineer with a focus in algorithm development for data analysis and image processing.
Jan Lause 🟦 @janla.. @JanLause
703 Followers 1K Following data science PhD student 🧬🧠🖥️ scRNA data, retina & brain | sci-comm 🤖❤️🌍 AI & sustainability | easily sidetracked by small details in plots & birds 📈🔍🦜
Dmitry Kobak @hippopedoid
7K Followers 239 Following Researcher at Tübingen University. Manifold learning, contrastive learning, scRNAseq data. Excess mortality. Born but to die and reas'ning but to err.
Christian Szegedy @ChrSzegedy
32K Followers 2K Following #deeplearning, #ai research scientist. Opinions are mine.
Climatematch Academy @climatematch
1K Followers 293 Following A volunteer-driven, wide-reaching, inclusive and approachable program to introduce computational methods for climate science.
Tahereh Toosi @taherehtoosi
570 Followers 419 Following Associate Research Scientist at Center for Theoretical Neuroscience @cu_neurotheory @ZuckermanBrain @Columbia K99-R00 scholar @NIH @NatEyeInstitute
Bin Yu @BioIntelligeNet
163 Followers 1K Following Ph.D. student in Komiyama lab at UCSD, study olfactory learning, neurogenesis, and neuromodulation, U-DUB (UW) alumni
Consuelo (Chelo) Pér.. @Cheliuzz
750 Followers 2K Following Evolution of reward perception and behavior | Crecí escuchando historias de valientes en los versos de Chalino 🇲🇽 @ScienceStowers
Jess Jones @jones__jess
763 Followers 551 Following neuro Ph.D. candidate @uw 🪰 | '22 @hhminews gilliam fellow 🌱 | formerly @penn & @ucsc | she/her
Andrew Erskine @incisrdrew
222 Followers 502 Following Software engineer @ NeuroGEARS. Formerly neuro postdoc @ USC studying neurophysiology of sensation and behaviour.
Zidan Yang | 杨紫�.. @Zidan_Yang
299 Followers 576 Following Neuroscience PhD candidate @MPFNeuro Inagaki lab. Previously @UCL @NeuralCompLab @unibirmingham @eLifeCommunity
Matt Isaacson @misaacson
114 Followers 49 Following BME/Neuroscience postdoc working on AD mouse models, multiphoton imaging, and VR!
Fanny Cazettes @FannyCazettes
459 Followers 311 Following Neuroscientist @CNRS, TTI fellow @SCglobalbrain Find me @fannycazettes.bsky.social and @[email protected]
Evelyn W🏀 @evelynwong23
721 Followers 925 Following MD-PhD student @stanfordmed | AB @harvard & @mitbrainandcog Boyden Group | MPhil @neuralcomplab | Marshall Scholar ‘21 | PD Soros Fellow ‘24
Jen Rinker 👩�.. @DrJRink
2K Followers 2K Following Asst Prof @neuro_MUSC 🧠 👩🔬 We study the neurobiology of stress & alcohol use. MI (🥶)⇾DC (👩🎓)⇾NC (🐏🩵)⇾SC (🧪) Opinions my own. (she/her) #WomeninSTEM
Tahra Eissa @EissaTahra
558 Followers 645 Following BRAIN Initiative K99/R00 fellow @CUBoulder | @leadingEdgeSymp fellow | @AllenInstitute NGL | computational neuroscience | decision-making | musician
Karen Mruk @MrukKaren
721 Followers 2K Following Assistant professor @ECUBrodySOM amateur #bowler. Formerly @umassmedbiochem and @ChemSysBio. In love with #zebrafish. Opinions are my own.
Alice Nam @alicenammm
103 Followers 161 Following PhD Candidate in the 🧠 Hong Lab 🐭 @CMU_Bio, lover of French fries, deep conversations, and learning/teaching/mentoring. Undergrad @BrandeisU
Steven Brem @StevenBremMD
3K Followers 5K Following Professor of Neurosurgery at the University of Pennsylvania, neurosurgeon, scientist, innovator, advancing clinical trials to meet unmet needs in neuro-oncology
En Yang @The_En_Yang
159 Followers 198 Following Assistant Professor @UNC, previous research scientist@Ahrens lab/Janelia. Neuroscientist, applied physicist, engineer, inventor.
Dileep George @dileeplearning
10K Followers 1K Following AGI research @DeepMind. Ex cofounder & CTO @vicariousai (acqd by Alphabet) and @Numenta. Triply EE (BTech IIT-Mumbai, MS&PhD Stanford). #AGIComics
J Brendan Ritchie @jbrendanritchie
926 Followers 1K Following Neuroscientist studying vision. Recovering philosopher. Views are my own. He/him
Rylan Schaeffer @RylanSchaeffer
3K Followers 979 Following CS PhD student with @sanmikoyejo at @stai_research @StanfordAILab
Sophia Sanborn @naturecomputes
4K Followers 3K Following Theory, ML, neurotechnology @ https://t.co/OmhC0RyxZp | Organizer @neur_reps | Prev: @geometric_intel @berkeley_ai @redwood_neuro @intelai @harvard
Tian-Ming Fu @futianming
175 Followers 549 Following
Ann_Huang @AnnHuang42
155 Followers 332 Following NeuroAI 🧠🤖PhD student @PiN_Harvard | 2023 @KempnerInst graduate fellow | undergrad @mcgillu | prev intern @Mila_Quebec @EPFL @Harvard
Antoine de Comité @AntoineComite
219 Followers 291 Following postdoc @MIT | Comparative models of motor control | PhD from @UCLouvain_be
Ourania Semelidou @OSemelidou
200 Followers 275 Following Neuroscientist, interested in perceptual alterations in autism. Postdoctoral researcher @NCMagendie, in the team of @africk19
Songs of Conquest @songsofconquest
24K Followers 3K Following A turn-based strategy game inspired by 90s classics. Out now: https://t.co/lZcgwA3vNu…
Marcella Noorman, PhD @MarcellaNoorman
119 Followers 210 Following Mathematician, theoretical neuroscientist, cat lover. Postdoc in Hermundstad lab at Janelia Research Campus.
Harsha Gurnani @HarshaGurnani
326 Followers 678 Following Neural dynamics, control, learning. Love talking about the brain, math, science+arts! ❤️ animals, all of them. Striving for kindness. She/her
Bilal Haider @haiderl.. @haiderlab
520 Followers 275 Following Neurons, circuits, visual perception | Associate Professor, Georgia Tech & Emory University, Atlanta, USA | https://t.co/YmnXDCbtnO
Alex Bisson @Archaeon_Alex
4K Followers 4K Following FIND ME AT BLUESKY: @archaeon-alex.bsky.social 🇧🇷🇺🇸Cell Biology of Archaea. Assistant Professor of Biology at Brandeis University.
Moustafa Algamal @moustaam
168 Followers 301 Following Instructor in Neurology @MGHNeurology @harvardmed. Calcium imaging/ two-photon microscopy/Dementia and neurodegeneration. Opinions are my own.
Brendan Ito @mousejesus
334 Followers 294 Following @NSF GRFP Fellow || PhD Candidate @jesseGlab || @CornellNBB || From Hawaii || Sneaker Enthusiast
Ben Campbell @lysergicdesigns
975 Followers 161 Following Engineering fluorescent protein biosensors for neuroscience applications | Postdoctoral Scholar at UC San Diego | עם ישראל חי
Claire Dessalles @ClaireDessalles
1K Followers 1K Following Postdoc @RouxLab investigating topological defects and morphogenesis. Former PhD @Polytechnique, on tensile stresses and endothelial cells.
Wenjie Liu @wenjieliu7
71 Followers 111 Following Optical Microscopy | Launching new lab @ Zhejiang University & Zhejiang Lab
Osvaldo Contreras @osvaldoics
2K Followers 4K Following 🇨🇱 FirstGen | Cell Cycle Networks + Chromatin Dynamics in Regeneration & DevEvo 🧬 @UNSWMedicine | #MyoTwitter 📝 @Prelights @PddcSydney #eLifeAmbassador
Rintu Kutum @rintukutum
1K Followers 3K Following Group leader, Augmented Health Systems | KutumLab | Faculty Fellow, Computer Science Depart; Faculty, Trivedi School of Biosciences; @AshokaUniv @repro4everyone
Surjeet Singh @SinghNeuro
659 Followers 1K Following Post-doc @KaczorowskiLab @UMich @jacksonlab | Engineer/Neuroscientist | Alzheimer's Disease.Data from 56 different species sheds light on the diversity and evolution of cerebellar folding in mammals. elifesciences.org/articles/85907…
@marius10p @naturemethods @computingnature Congratulations guys! Such a wonderful tool… and it's really great to have a resource with all the changes (and even "lesion experiments")
@marius10p @naturemethods @computingnature Thanks Marius to you and your team for your continued work on this resource. I assume that KS4 was optimized for neuropixels, but was any testing done on v-probe data? We've had success with KS2.5 for v-probes, but would gladly upgrade if KS4 were better. Thanks again!
Out yesterday from the Singh and Carpenter labs! The CPJUMP1 Resource comprises Cell Painting images and profiles of 75 million cells treated with hundreds of chemical and genetic perturbations. nature.com/articles/s4159…
@marius10p @naturemethods @computingnature Congrats, Marius! We've been using KS4 quite a bit recently and it's great. Thank you for implementing in python and for fielding our inquiries!
The latest version of the spike-sorting algorithm #kilosort (Kilosort4) is now out. Check out its improved performance compared to previous versions, owing to the use of a graph-based clustering approach. @marius10p @computingnature @HHMIJanelia nature.com/articles/s4159…
@marius10p @naturemethods @computingnature I stopped at your poster at SFN 2023. Can TDT or plexon data be imported into this software?
@computingnature @mlphillips17 A precise, detailed, and dispassionate response. Considering the extent to which cellpose was mishandled to produce a favorable comparison in the Nat Methods paper, the tone and professionalism of this response is something to aspire to.
Transformers are not always all you need...
#Cellpose remains the state-of-the-art for cellular segmentation. See our new paper, in response to Ma et al, Nat Methods 2024. Paper: biorxiv.org/content/10.110… Leaderboard results ⬇️⬇️⬇️
@marius10p @naturemethods @computingnature Congrats! Looking forward to trying it soon!
Janelia Group Leaders @marius10p & @computingnature have released Kilosort4, the newest version of the spike-sorting software that enables scientists to understand the mountains of data collected from recording the simultaneous activity of 100s of neurons. janelia.org/news/janelia-s…
There is a lot of hype right now about Transfomers. I had assumed they were a breakthrough, but some of the early work was exaggerated and in a fair fight the metrics would be closer. This preprint suggests that in a fair fight Cellpose still wins. biorxiv.org/content/10.110…
@redklavier However, we recommend our "super-generalist" cyto3 model as it has been trained on more datasets from even more imaging modalities (github.com/MouseLand/cell…)
#Cellpose remains the state-of-the-art for cellular segmentation. See our new paper, in response to Ma et al, Nat Methods 2024. Paper: biorxiv.org/content/10.110… Leaderboard results ⬇️⬇️⬇️
🔬 Calling all #bioimageanalysis pros and fans! Seeking unique #cellpose application use cases for my computer vision students. Got any fascinating examples to share? Let's play "Will it cellpose?" Excited to see your unusual submissions! 😁 Please share on!
Excited to share that our paper on sound-evoked facial movements in mice is now out in Current Biology: authors.elsevier.com/a/1im623QW8S6D… A couple of summaries for different crowds below:
Today we are sharing our most complex #assembloid to date: a 4-part model of the human ascending neural somatosensory pathway generated by functionally integrating stem cell-derived cerebral cortical, thalamic, spinal and sensory #organoids. Check out the @biorxivpreprint and…
Happy International Women’s Day to all my fearless brilliant women and non-binary fellow scientists cracking that glass ceiling a little more every day!
Excited to launch the new @neuromatch NeuroAI course this summer! This is our first advanced course on the shared principles of intelligence in artificial and natural systems. Applications are open until March 17th (for TAs) and March 24th (for students). neuroai.science/p/unveiling-th…
Very excited to👂about Unsupervised Pretraining in Biological Neural Networks🤓 @marius10p @computingnature @Lin_Zhong_ion At the Geometry & Dynamics of Learning Workshop - A.Gajic @arna_ghosh A.Chadwick @ermgrant @helena_liu24 @smusslick @art_pel_ @rmnpogodin @stefesseM 👀
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