Principal Investigator @ Altius Institute.
Affiliate Associate Professor @UW.
Previously @MIT_CSAIL (postdoc), @NKI_nl/@tudelft (PhD).
Loves a good analogy!meuleman.org Seattle, WAJoined September 2010
1/6 🍍🍕🧬 What do a photo of Italians savoring pineapple pizza and a synthetic DNA sequence have in common? Both can be intricately crafted by generative AI! Introducing DNA-Diffusion, our AI model set to advance #SyntheticBiology and #GeneRegulation: biorxiv.org/content/10.110…
I started a company!
it's called Latent Interfaces and I see it as a vehicle for exploring latent spaces by building new kinds of data interfaces.
I shared my first update on what we're doing in my newsletter:
enjalot.substack.com/p/latent-inter…
Hey have you heard about the @openbioml community? We have just launched an open and collaborative project with them to explore recent Diffusion architectures to model DNA regulatory sequences. Join us if this is exacting for you! @bioinfolucas@nameluem
Hey have you heard about the @openbioml community? We have just launched an open and collaborative project with them to explore recent Diffusion architectures to model DNA regulatory sequences. Join us if this is exacting for you! @bioinfolucas@nameluem https://t.co/wgy0VQz5Bg
A 1-minute lightning talk my group put together for this year's #VIZBI2022 meeting:
vizbi.org/Lightning/2022…
It highlights a few of our ideas and activities towards what we call Augmented Genomics
Reason #523 why the metric system is superior:
During pregnancy, the number of centimeters measured from pubic bone to top of belly (a.k.a. fundal height) indicates how many weeks pregnant.
I guess '33 cm' means things are about to get a lot less quiet around here soon...(!)
If you're attending @lmrl_bio#NeurIPS2021#LMRL, come check out Peter Bromley's poster (A13)!
tl;dr: We built models that generate and tune DNA sequences to have properties akin to context-specific accessible chromatin.
5 min. video summary here: youtu.be/GUJsXwR7lyg
30K Followers 2K FollowingDirector of computational biology. On my way to helping 1 million people learn bioinformatics. Educator, Biotech, single cell. Also talks about leadership.
23K Followers 7K FollowingChair, Comp Bio & Medicine Program, Princess Margaret Cancer Centre. Assoc Prof, Med Biophysics & Comp Sci, University of Toronto. COI https://t.co/CvupKNIjZr
7K Followers 1K FollowingRay and Stephanie Lane Professor of Computational Biology at CMU School of Computer Science @CMUCompBio @SCSatCMU @CarnegieMellon
4K Followers 1K FollowingPost-doc @StanfordMed, studying genomics, machine learning, and fruit. Editor @StanfordAILab Blog, @JOSS_TheOJ. My code is like our genomes: most of it is junk.
128K Followers 2K FollowingNature Genetics is a monthly journal publishing high impact research in genetics and genomics. RT/like=interesting/relevant, not necessarily endorsement.
3K Followers 1K FollowingProfessor for Translational Epigenetics, University Medical Centre Goettingen, University of Goettingen, DE …oftentimes aspiring fiction writer.
36K Followers 19K FollowingChair, Department of Computational Biomedicine, Cedars-Sinai Medical Center, Los Angeles. Informatician. Data scientist. AI. Atari enthusiast. FSU & UMich grad.
3K Followers 5K FollowingResearch group leader @mrc_hgu @EdinburghUni interdisciplinary research on disease #epigenetics. Part-time solo dad. Occasional music and climbing.
3K Followers 3K FollowingInteresting things happen around me.🦜🦜Meta+zany+altricial distributed computation. My likes are the best likes. Ideal figure to slow world aging rate
1K Followers 5K FollowingPhysicist and physician doing theoretical and cognitive neuroscience. Tweets on neuroscience, maths, physics, biology, evolution, and occasionally random stuff.
415 Followers 303 FollowingEntrepreneurs, investors, medical cosmetology, biotechnology research, AI.
Love to learn about the scenery and food from different regions.
316 Followers 562 Followingpathologist-scientist interested in how molecules impact human development, health, and disease | PGY3 @MGHPathology | @HopkinsMDPhD and @BrownUniversity alum
0 Followers 19 FollowingCEO of Si Yanli Cosmetics Industry Co., Ltd., the largest shareholder of Dasheng Garment Factory, the hostess of 19 chain restaurants, 8 movie theaters, and the
291 Followers 591 FollowingPhD AI for Drug Discovery @QMUL, @MSDintheUK. ex-{@TUDelft, @CureVacRNA}. Researching the intersection of AI and biology to improve human health. 🧬🤖
30K Followers 2K FollowingDirector of computational biology. On my way to helping 1 million people learn bioinformatics. Educator, Biotech, single cell. Also talks about leadership.
29K Followers 446 FollowingComputational biologist @HelmholtzMunich, prof @TU_Muenchen & associate PI @sangerinstitute. Dad of 4 and mountain lover. Department news, see @CompHealthMuc
139K Followers 1K FollowingDon't be fooled by the rocks that I got, I'm still Oded from the block.
TED: https://t.co/rcOm9TSTf5
Huberman Lab Podcast: https://t.co/xZTNlx9nbi
23K Followers 7K FollowingChair, Comp Bio & Medicine Program, Princess Margaret Cancer Centre. Assoc Prof, Med Biophysics & Comp Sci, University of Toronto. COI https://t.co/CvupKNIjZr
25K Followers 2K FollowingJust another LLM. Tweets do not necessarily reflect the views of people in my lab or even my own views last week. https://t.co/fZAnUCqd12
7K Followers 1K FollowingRay and Stephanie Lane Professor of Computational Biology at CMU School of Computer Science @CMUCompBio @SCSatCMU @CarnegieMellon
4K Followers 1K FollowingPost-doc @StanfordMed, studying genomics, machine learning, and fruit. Editor @StanfordAILab Blog, @JOSS_TheOJ. My code is like our genomes: most of it is junk.
50K Followers 2K FollowingDeputy Director General of EMBL, Director of EMBL-EBI. I have an insatiable love of biology. @[email protected]. I also work with ONT, Dovetail + GeL.
6K Followers 246 FollowingGWAS whisperer
'Nothing in biology makes sense except in the light of evolution'
-Dobzhansky
DMs open
Executive Director, Integrative Biology @Pfizer
8K Followers 939 FollowingAssociate Professor of CS @ University of Maryland. Proud Rust advocate! I ♥ science & compiled, statically-typed programming languages! Views are my own.
22K Followers 4K FollowingScientific editor at Nature Methods. Ph.D. Also at @[email protected] 🔬 All tweets and comments represent my independent views. (she/her)
128K Followers 2K FollowingNature Genetics is a monthly journal publishing high impact research in genetics and genomics. RT/like=interesting/relevant, not necessarily endorsement.
3K Followers 1K FollowingProfessor for Translational Epigenetics, University Medical Centre Goettingen, University of Goettingen, DE …oftentimes aspiring fiction writer.
21K Followers 1K FollowingBest-selling author of 'The Rhine' & 'Why The Dutch Are Different' (https://t.co/T0jULUwrcm). Columnist @ADnl. Writer, aid worker, speechwriter, recovering Tory
351 Followers 385 FollowingExploring the 🧬 basis of diseases via multi-omic data integration 👨💻 @Stanford | ❤️ Computer Science best practices in biology | https://t.co/WayajPVLAi
316 Followers 562 Followingpathologist-scientist interested in how molecules impact human development, health, and disease | PGY3 @MGHPathology | @HopkinsMDPhD and @BrownUniversity alum
291 Followers 591 FollowingPhD AI for Drug Discovery @QMUL, @MSDintheUK. ex-{@TUDelft, @CureVacRNA}. Researching the intersection of AI and biology to improve human health. 🧬🤖
315 Followers 1K FollowingPostdoc at Yale University in Reilly Lab. Human evolution, population genomics, and noncoding variants. All views my own. He/him.
430 Followers 0 FollowingThis account is now only a placeholder. Twitter has become an abominable hellhole, with despicable, bigoted policies.
Find me on LinkedIn, Bluesky. Not here.
20K Followers 976 FollowingComputational biologist, data scientist, digital artist | he, him | https://t.co/qoZIk5WtE6 | Opinions are my own and do not represent UT Austin.
2K Followers 2K FollowingNO LONGER HERE. FIND ME IN THE SKY. Bioinformatics Researcher, UBC Professor and Investigator at BC Children's Hospital Research Institute; He/Him
561 Followers 609 FollowingGroup Leader and Assistant Professor at Karolinska Institutet. Applying genomics tools to study nervous system regeneration. Interested in…see below
672 Followers 936 FollowingRNA Biology, Computing, Heavy music, Videogames, and other horrible things.
MSc: @Unipisa
PhD: @MDC_Berlin
Postdoc: @UCSF
First supporter of the @CalvielloLab
3K Followers 131 FollowingR/Bioconductor package developer and old postdoc @DKFZ and @NCT_HD. I wrote #ComplexHeatmap, #circlize, and many other R/Bioc packages.
4K Followers 5K Followinggeek, entrepreneur, 'I strictly color outside the lines!', opinions r my own indeed. @ayirpelle , universal handle at this time
202 Followers 202 FollowingImmunologist, molecular epidemiologist, Deputy Director in Global Health Discovery & Translational Sciences @gatesfoundation, parent, Ph.D., views my own