👾 Karthik @xrayfoo
Postdoc @UCLA | PhD @scrippsresearch | https://t.co/K5wjiCFNGw | 🐘@[email protected] gkarthik.com La Jolla Joined April 2010-
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👾 Karthik retweeted
Got milk virus genomes? (or any H5N1?) Throw them at usher.bio and see where they land in per-segment trees of tens of thousands of public Influenza A H5N1 sequences!
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👾 Karthik retweeted
For a report on our analyses of #H5N1 in cattle, see worobey bsky social
👾 Karthik retweeted
My colleagues and I have just posted a "Note about availability of #H5N1 2.3.4.4b consensus sequences from cattle and other species" @virological_org. Consensus genomes and metadata. virological.org/t/note-about-a…
👾 Karthik retweeted
#GPUalgorithms achieve significant speedup in statistical #phylogenetics, exemplified by estimating West Nile virus introduction timing from 104 genomes using BEAGLE v4.0.0 in BEAST. [co-authored by EVBC members @LemeyLab @suchard_group] doi.org/10.1093/bioinf…
👾 Karthik retweeted
In a @VanityFair story, @KatherineEban oddly misrepresented an investigation into @GISAID and Peter Bogner by @sciencecohen and me; suggested our story was a volley in the lab leak debate; and let Bogner dismiss it as a "hit piece." Here's our response. science.org/do/10.1126/sci…
👾 Karthik retweeted
My colleague @sciencecohen and I spent months investigating @GISAID and the mysterious man behind it, Peter Bogner. Here's what we found. science.org/content/articl…
Great to see these API connections!
Great to see these API connections!
👾 Karthik retweeted
🧵for our latest preprint on the intrahost evolution of SARS-CoV-2 virus in an immunocompromised individual (60s) with a history of cancer chronically infected for at least 471 days (ongoing) with consistently replicating viruses at a high viral load. 1/n medrxiv.org/content/10.110…
👾 Karthik retweeted
we're deep into Omicron's reign. does that mean we definitely need an Omicron-specific vaccine? it's complicated for at least three big reasons: timing, Omicron's weirdness, and the vagaries of virus evolution. 1/ theatlantic.com/health/archive…
👾 Karthik retweeted
We have just released two preprints on the origin of SARS-CoV-2: 1. "The Huanan market was the epicenter of SARS-CoV-2 emergence" zenodo.org/record/6299116…
👾 Karthik retweeted
I wrote about what's next for the pandemic—the decisions we will *have* to make, if we are to bring COVID under control. 1/ theatlantic.com/science/archiv…
👾 Karthik retweeted
(1/13) By the end of the Omicron wave, nearly all of us will have glimpsed spike in some form or another—injection, infection, both. I wrote about what that means... and why “widespread exposure” does not necessarily equate to “widespread protection.” theatlantic.com/health/archive…
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3K Followers 715 Following Pathogen Genomics, Genomic Epidemiology, Data Visualisation, Phylodynamics Head of Data Science, CERI, SU 👩🏾💻🦠🧬📈 @yale 2016. @imperialcollege 2018.
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3K Followers 1K Following Evolutionary Virologist at the @SystemsVirology lab, University of Tokyo 🇯🇵 Molecular Evolution, Phylogenetics, Viral Genomics (he/him) 💻🔬🏳️🌈
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255K Followers 569 Following new book *Talent: How to Identify Energizers, Winners, and Creatives Around the World*, https://t.co/7bU5cUdOBc, Conversations with Tyler, Bloomberg Opinion.Trends for United States
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