Jay Zhao @Shijie_Zhao
Microbiome, Microbial Genetics, Single-cell, Spatial Sequencing, high-throughput microbiome methods. Postdoc@Broad, PhD@MIT shijiezhao.github.io Cambridge, MA Joined July 2015-
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H3K4me3 is a post-transcriptional histone mark | bioRxiv biorxiv.org/content/10.110…
I read this Cell paper that argues to have discovered a molecule (betaine) that mimics the geroprotective effects of exercise. This is a very valuable multi-omics resource, but the authors seemed to get caught in the rabbit hole of chasing a high-impact narrative🧵
This rate of validation suggests that affinity reagents such as antibodies should be considered non-specific until proven otherwise: 357 validated antibodies out of 1,124 tested. .
Grateful to work with the wonderful @Vilcek Foundation and the super talented @HIROKI_OTSUKA on a short manga highlighting our research and my journey as an immigrant scientist! 🧪🦠🧬 vilcek.org/news/microbes-…
Good news. After 2 rounds of venetoclax, GO, + chemo, my daughter has had a complete response. No detectable signs of the tumor that had completely shut her eye, which she was dangerously close to losing. 🙏🏾 to the amazing team @StJude & the community for helping us get here.
1/ Still using read.csv() to load big files in R? That’s like trying to fill a pool with a teacup. Here’s how to go 40x faster.
She nailed it!
I'm late to review the "Illusion of Thinking" paper, so let me collect some of the best threads by and critical takes by @scaling01 in one place and sprinkle some of my own thoughts in as well. The paper is rather critical of reasoning LLMs (LRMs): x.com/MFarajtabar/st…
I'm late to review the "Illusion of Thinking" paper, so let me collect some of the best threads by and critical takes by @scaling01 in one place and sprinkle some of my own thoughts in as well. The paper is rather critical of reasoning LLMs (LRMs): x.com/MFarajtabar/st…
Just published! Even NASA cleanrooms—designed to be ultra-clean—harbor resilient, novel bacteria. 26 new species were found, some forming biofilms, resisting radiation, and producing biotech-relevant compounds. Check it here: microbiomejournal.biomedcentral.com/articles/10.11…
I got hit by some rather sudden and extreme financial hardship so if anyone is in need of remote wetlab contract research, strictly BSL1, do let me know. Currently scrambling for gigs. Plant, Bacterial, Archaeal Bioeng Custom Lab Hardware Turn Key Genetic Design Please RT 💚
Editing 14 genes is no small feat, but I am not seeing enough evidence that "it is a dire wolf". Our community needs to communicate better to the public, now mor than ever, and imo that includes not exaggerating what we can deliver.
Editing 14 genes is no small feat, but I am not seeing enough evidence that "it is a dire wolf". Our community needs to communicate better to the public, now mor than ever, and imo that includes not exaggerating what we can deliver.
In 1999, I was assigned to design the expansion pack to Age of Empires 2. I chose The Conquerors as the theme, and wishing to have 4 civs (as we had on Rise of Rome), I chose the Spanish, the Aztecs, the Huns, and the Mayans. The project went ahead extremely well. We were…
When another failed biotech CEO tells you, “The best use of our remaining cash is to invest in our preclinical pipeline.”
PDF parsing is solved (again). Mistral's new OCR API — parses 1000-2000 pages for $1 — achieves state of the art results on tables, multilingual — supports structure: images, bounding boxes, scans, equations 90% of the world's organizational data is in PDFs.
Directed evolution at its finest. Altering TEV protease specificity. biorxiv.org/content/10.110… Congrats! @CarlDenard
What the actual fuck. Cursor just one shot this entire implementation. Getting Cursor to plan thoroughly based on your requirements is a game changer. plan.mdc file I used in comments.
So we beat on. Gene/cell therapies often use proteins that could be recognized/rejected as non-self by our immune system. We combine algorithms to build proteins that are therapeutically relevant and can masquerade as our own parts doi.org/10.1101/2025.0…
Roche SBX preprint out biorxiv.org/content/10.110…

Sudarshan A. Shetty (... @gutmicrobe
2K Followers 2K Following Senior Scientist Bioinformatics and Microbiology | Danone Global Research & Innovation | Views are my own 🇮🇳 🇳🇱 @gutmicrobe.bsky.social
Elisa Granato @Prokaryota
27K Followers 3K Following Sci-comm | Researcher | she/her 🇪🇺🦠🧫🔬| prokaryota on Bsky
Elisabeth Bik @MicrobiomDigest
143K Followers 45K Following Science integrity consultant, PhD. #ImageForensics Previously @ Stanford and (gasp!) uBiome. https://t.co/3DPRMloSwv. https://t.co/w7myEIVwOk 🇳🇱🇺🇸
iMeta @iMetaScience
3K Followers 931 Following A Wiley partner journal aims to promote metagenomics and bioinformatics by publishing research articles, reproducible methods, protocols, and reviews.
Daoming Wang @DaomingWang1
264 Followers 215 Following PhD in genomics, with a particular interest in microbiome and systems biology
Ming "Tommy" Tang @tangming2005
41K Followers 2K Following Director of bioinformatics at AstraZeneca. YouTube at chatomics. On my way to helping 1 million people learn bioinformatics. Also talks about leadership.
Jonathan Eisen @phylogenomics
63K Followers 14K Following Professor @UCDavis studying #phylogenomics & function of microbes & #microbiomes. Other: #BirdPhotography #RedSox #Type1. Past: @harvard @stanford @JohnsHopkins
Host-Microbe Interact... @HostMicrobeLit
3K Followers 311 Following Not a bot. Post-doc trying to make it easier to keep up with literature and promote good research conduct.
Nature Reviews Microb... @NatureRevMicro
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Mehrbod Estaki @MehrbodEstaki
1K Followers 1K Following CSO at @invp_lab. I science sometimes. Interested in all things #microbiome, #bioinformatics & data analysis. Gone over to https://t.co/gCvJCrAmIR
Will Chen @wchenomics
766 Followers 671 Following @DamonRunyon Fellow at Baker lab @UWproteindesign. PhD with @JShendure. mainly at https://t.co/WpSk6RTizP
Marcus Böhme @BoehmeMarcus
4K Followers 2K Following #Microbiota-#Gut-#Brain-Axis | from Early Life to #Aging | Neuroscientist | Working in R&D | Musician | PhD @uniklinik_jena | formerly @Pharmabiotic #cryanlab
Tami Lieberman @conTaminatedsci
5K Followers 809 Following Microbiology, evolution, genomics. Thinking about the ~10^9 bacterial mutations generated in and on you daily. Assoc Prof MIT https://t.co/2mWZNzeXLX
Gang Fang @gangfang_1
1K Followers 1K Following Long read (DNA, RNA) | Epigenetics (bacteria, human) | Professor of Genomics @IcahnMountSinai | Humid Lab🧫💻🧪 https://t.co/CQwmHW3Seh
Kathryn Kauffman @k6logc
644 Followers 1K Following Assistant Prof in Dept Oral Biology, School of Dental Medicine @UBuffalo | #phages marine2mouths oceans2oral seas2saliva | @MIT @WHOI alum
Victoria Smith @ooprorawgq88933
2 Followers 512 Following
SunshineAbigailTaylor @Dorvpoc0443
23 Followers 2K Following Success is my superpower Living for the moments that matter
sara Hazem @saraHaz65011922
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Anjali Mishra @anjali461721
170 Followers 5K Following Biochemistry Undergrad with interest in Bioinformatics
Joy L @joyl88888888
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Nicvu @Nicvu6235
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takashi_mk_ @Simoooooooo6
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Viktor Volkomorov @volkomorov59043
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Fifi @fipalapa
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Oumirtu @Oumirtu764
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Taiyi Sun 孙太一 @suntaiyi
837 Followers 2K Following Associate Professor of Political Science at Christopher Newport University / Politics, Disaster and Civil Society, East Asia, DC / RT does not mean endorsement
wuluwulu @littlewuluwulu
12 Followers 277 Following
Zhi Wang @zhi_chloe_wang
35 Followers 144 Following Biophysics PhD in Xiaoliang Sunney Xie lab.Pekinger. Transcription factor network & Genome regulation.
Mrunal @MrunalMhatre_
46 Followers 1K Following
Tianyi Luo @Tianyi3434
33 Followers 258 Following Naive idealism; Phd student at Penades lab @imperial and Dai lab of Tongji university#sweet food #phage#MGE#bacterial evolution
The Gibbons Lab @UMas... @GibbonsGenomics
457 Followers 1K Following The Gibbons Lab in @UMassfoodsci at @UMassAmherst studies fungal and bacterial genomics.
ying yang 🌱🍀 @yingyang1220471
20 Followers 278 Following Yeast technology solutions specialist: protein-protein interaction🍃;Y2h screening 🌿 🍅 Plant science,Arabidopsis researcher 和🌱🍃🌺
Nour Daadouch @noor_dado_
4 Followers 173 Following
Abhishek Jha @abhishek_jha_3
98 Followers 296 Following Co-Founder & CEO, @elucidatacorp | Fast Company's Most Innovative Biotech Companies 2024 | Data-centric Biological Discovery | AI & ML Innovation
AntBio @AntBio_
27 Followers 562 Following AntBio is a biotechnology group company dedicated to serving life sciences, aiming to help scientists accelerate research and improve work efficiency.
fragilefort @fragilefort
2 Followers 49 Following Bioinformatics student. I post about my learning process and my opinions about the current state of the academic society (mostly complaining).
Theausee @TheauseeYn_VKa
134 Followers 4K Following
Stefano @Stefano81994940
2 Followers 80 Following
Carlotta Ronda @RondaCarlotta
520 Followers 808 Following PI at the Innovative Genomic Institute @igisci @UCBerkeley. @Simons_SoF alumna,Microbiome Designer/Host-Microbiome interactome/Syn&System Bio/CRISPR/👩🏼🔬STEM
Learthaw @learthaw97906
72 Followers 2K Following
Jenni @j_lemonds42
251 Followers 3K Following
Tercthoon @TercthoonkLJ
138 Followers 3K Following
Denesthes @denesthes45457
148 Followers 7K Following
Eugene @eugenesnest
369 Followers 3K Following https://t.co/pURstJXIJq Technical AI governance · Machine Learning · Applied cryptography for verifiable claims & secure compute · Systems
Singh@08tannu @river_fire_sky
49 Followers 815 Following Have faith in your thoughts, it creates your reality ❤️ ❤️ Jai shree Krishna 🙏🙏
Nemezida @Nemezidah
489 Followers 413 Following part time DJ, full time professional nihilist since 1996 streams: https://t.co/Ej8C1H70dg telegram channel: https://t.co/dMnYVUdv9u
Krem @krem123
833 Followers 4K Following Finance | Travel | Technology and any entertaining Twitter memes
Pleanear @pleanear28153
43 Followers 541 Following
Lerteaddea @Lerteaddea8I5
72 Followers 2K Following
Jenny Marschall @jenny_marschalg
953 Followers 1K Following Love risks everything and asks for nothing...
Alif Bin Abdul Qayyum @abaq_97
3 Followers 255 Following
Feng JU (鞠峰) @richieju520
38 Followers 206 Following Assistant Professor, Environmental Microbiome and Biotechnology Laboratory (EMBLab), Westlake University
Mansi Bansal @mansibansal002
5 Followers 392 Following
Shaukat Ullah @Shaukat86061514
91 Followers 1K Following MS student 🧑🎓 at UCAS china 🇨🇳 major Molecular biology and biochemistry (Gut Microbiome 🦠🧫, reverse vaccinology 💉💉)
Ayesha @MullaBegum83528
0 Followers 51 Following
Herbert R. Sim @HerbertRSim
403K Followers 338K Following CMO @AICEAN_AI 📹 VC https://t.co/zjtLNJnVNp 📊https://t.co/ezk6p49ePk (1997) 🤖 https://t.co/oNUDO3nhNJ (1999) 🧠 https://t.co/QgASuahnNZ (2002) 🧬 @XcomErc20 ⚔️ | https://t.co/FJGx2ilPTd
徐昊腾 @garland1031
1 Followers 47 Following
David R. Liu @davidrliu
74K Followers 64 Following Professor at Harvard, Broad Institute, & HHMI. Our lab integrates chemistry & evolution to illuminate biology & enable new therapeutics. IG/Threads: @davidrliu1
Elisabeth Bik @MicrobiomDigest
143K Followers 45K Following Science integrity consultant, PhD. #ImageForensics Previously @ Stanford and (gasp!) uBiome. https://t.co/3DPRMloSwv. https://t.co/w7myEIVwOk 🇳🇱🇺🇸
Lior Pachter @lpachter
47K Followers 2K Following Bren Professor of Computational Biology @caltech. Blog at https://t.co/FFQzhEsmhi. Tweets represent my views, not my employer's. #methodsmatter
iMeta @iMetaScience
3K Followers 931 Following A Wiley partner journal aims to promote metagenomics and bioinformatics by publishing research articles, reproducible methods, protocols, and reviews.
Daoming Wang @DaomingWang1
264 Followers 215 Following PhD in genomics, with a particular interest in microbiome and systems biology
Michael Baym @baym
22K Followers 2K Following Microbiology, evolution, antibiotic resistance, applied math, molecular biotech. Associate Professor @HarvardMed. Basic research is the engine of progress
Ming "Tommy" Tang @tangming2005
41K Followers 2K Following Director of bioinformatics at AstraZeneca. YouTube at chatomics. On my way to helping 1 million people learn bioinformatics. Also talks about leadership.
Host-Microbe Interact... @HostMicrobeLit
3K Followers 311 Following Not a bot. Post-doc trying to make it easier to keep up with literature and promote good research conduct.
Dmitri Petrov @PetrovADmitri
14K Followers 4K Following Evolutionary Biologist at Stanford. Rapid Evolution, Adaptation, and Genomics. Open Science advocate.
Jack A Gilbert (he/hi... @gilbertjacka
13K Followers 4K Following Microbial ecologist: EIC for mSystems; cofounder of BiomeSense; President for AMI. Father, Scientist, Pilot. Views are my own.
Sebastian S. Cocioba�... @ATinyGreenCell
31K Followers 9K Following Amateur 🌿 Biologist • Aspiring 🌺 Designer Researcher at Binomica Labs • Degreeless Heathen • Petunia Breeder • Open Lab Notebook: https://t.co/umYTLluuuw
ElowitzLab @ElowitzLab
12K Followers 1K Following Lab of Michael Elowitz at Caltech. Synthetic biology and systems biology
Science Magazine @ScienceMagazine
4.5M Followers 460 Following Cutting-edge research, news, commentary, and visuals from the Science family of journals. Follow @NewsfromScience for stories from our News team.
Fabian Theis @fabian_theis
35K Followers 424 Following Computational biologist @HelmholtzMunich, prof @TU_Muenchen & associate PI @sangerinstitute. Dad of 4 and mountain lover. Department news, see @CompHealthMuc
Vince Buffalo @vsbuffalo
16K Followers 3K Following Scientist at IDM. ♥s epidemiology, running, probability+statistics, 🦀, fly fishing, backpacking. Author of book Bioinformatics Data Skills. All views my own.
Niko McCarty. @NikoMcCarty
42K Followers 1K Following Science. Biology. Progress. Founding Editor @AsimovPress / Subscribe!
nature @Nature
2.6M Followers 3K Following Research, News, and Commentary from Nature, the international science journal For daily science news, get Nature Briefing: https://t.co/wGmQlQ8a4D
Will Chen @wchenomics
766 Followers 671 Following @DamonRunyon Fellow at Baker lab @UWproteindesign. PhD with @JShendure. mainly at https://t.co/WpSk6RTizP
Akos T. Kovacs @EvolvedBiofilm
21K Followers 2K Following Professor of Microbiome Ecology at @LeidenBiology 🇳🇱, posting mostly at 🦋: @evolvedbiofilm.bsky.social; also @MicroClockERC #ERCSyG
Xavier Lab @TheXavierLab
3K Followers 193 Following Genes to functions. Microbiome in health & disease. Computational biology. Chemical biology. Innate & adaptive immunity. https://t.co/fsw4zVpmOE
Vijay Sankaran @bloodgenes
11K Followers 3K Following Pediatric Hematologist/Oncologist, Geneticist, Stem Cell Biologist - @HHMINEWS, @BostonChildrens, @DanaFarber, @broadinstitute
Taiyi Sun 孙太一 @suntaiyi
837 Followers 2K Following Associate Professor of Political Science at Christopher Newport University / Politics, Disaster and Civil Society, East Asia, DC / RT does not mean endorsement
naturepoker @naturepoker1
2K Followers 1K Following Amateur biologist at Binomica Labs. Phage hunting. #amateurbiology @[email protected] https://t.co/dvUy3KczVN https://t.co/zAFupGZgMp
Joshua Starmer @joshuastarmer
25K Followers 238 Following I make StatQuest videos and sing more than I should. Contact: https://t.co/ZvHk9UJ0Tn
Stanley Qi Lab @stanleyqilab
3K Followers 468 Following News from Stanley Qi's lab at @Stanford / @Bioe_stanford / @Stanford_ChEMH. Tweets are not from Stanley Qi unless signed SLQ.
zhen liu @liuzhorion
135 Followers 228 Following Assistant professor@The Hong Kong University of Science and Technology, working on centrosome and cilia, using super-resolution fluorescence imaging.
Shixian @Shixian00000
100 Followers 212 Following
Carlotta Ronda @RondaCarlotta
520 Followers 808 Following PI at the Innovative Genomic Institute @igisci @UCBerkeley. @Simons_SoF alumna,Microbiome Designer/Host-Microbiome interactome/Syn&System Bio/CRISPR/👩🏼🔬STEM
X. Edward Guo 郭向�... @edguo84
5K Followers 3K Following Stanley Dicker Professor of Biomedical Engineering, Professor of Medical Science (in Medicine) @ColumbiaBME
Bing Guan (管秉�... @bing_guan
2K Followers 3K Following Freelance photojournalist based in NYC. Contributor @reuters, @business, @nytimes, @wsj and others. Adjunct @columbiajourn. Views my own, RTs not endorsements.
Ping Mu 🇺🇦 @PingMu_PhD
2K Followers 1K Following Associate Professor at Yale, study prostate cancer, fan of 3D printing, soccer and action figure. Dad of two corgi girls and a human boy. Views are my own.
bioRxiv Synthetic Bio... @bioRxiv_synbio
2K Followers 1 Following
American Chemical Soc... @AmerChemSociety
262K Followers 1K Following The American Chemical Society is one of the world’s largest scientific societies and a leading source of authoritative scientific info.
Erik Bernhardsson @bernhardsson
47K Followers 3K Following Building @modal when I'm not posting banger stuff about infra and AI
Xuhang (Hang) Li @Xuhang_Li
333 Followers 454 Following Accidental systems biologist, fan of metabolism, Postdoc in Marian Walhout Lab @UMassChan | PhD in Systems Biology @UMassChan | BS Fudan University
Daniel Han @danielhanchen
28K Followers 2K Following Building @UnslothAI. Faster RL / training. LLMs bug hunter. OSS package https://t.co/aRyAAgKOR7. YC S24. Prev ML at NVIDIA. Hyperlearn used by NASA.
Swapna Kumar Panda @swapnakpanda
214K Followers 198 Following | Tech Writer, Educator | Python, Java, JavaScript, SQL | DSA, Development | Free Resources, AI Tools | Other Version: @therealswapna | Building @JabardastDEV |
Xiao Wang @WangXiaoLab
6K Followers 507 Following Associate Professor at MIT Chemistry and Core Member at Broad Institute of MIT and Harvard
GREG ISENBERG @gregisenberg
528K Followers 882 Following I run a portfolio of internet companies and host @startupideaspod. CEO: @latecheckoutplz we build companies like @ideabrowser, @meetLCA, @boringmarketer etc
Roy @im_roy_lee
157K Followers 2K Following ceo @cluely | kicked out of columbia, harvard, community college graduate
Joseph A. Ladapo, MD,... @FLSurgeonGen
223K Followers 32 Following 25th State Health Officer & Surgeon General of the great state of Florida. Father of three. Runner. Advocate for healthy living.
Martin Kulldorff @MartinKulldorff
441K Followers 3K Following Epidemiologist, Biostatistician, Infectious Disease Outbreaks, Vaccine Safety, Shared Parenting. @gbdeclaration @NatlParentsOrg
Jay Bhattacharya @DrJBhattacharya
711K Followers 6K Following Emeritus Professor Stanford School of Medicine. MD, PhD. NIH Director.
Aaron Kheriaty @AaronKheriatyMD
349K Followers 884 Following Physician, psychiatry. Scholar @EPPCdc. Articles in @WashingtonPost @WSJ @Newsweek @FirstThingsMag @TabletMag. BOOK: The New Abnormal https://t.co/SOWEVlioGU
Ian Miller @ianmSC
129K Followers 597 Following Insert whatever credentials you think are important here - writer at @outkick author of ‘Unmasked’ and ‘Illusion of Control’
Dr Clare Craig @ClareCraigPath
273K Followers 1K Following Co-Chair HART: https://t.co/8NvaTOTiF5 Diagnostic pathologist, lover of data, digital pathology and AI, sceptical but optimistic. Views my own not the RCPath's.
Suneel Dhand MD @DrSuneelDhand
237K Followers 837 Following Metabolic Health Optimization, Natural Fat Loss, Insulin Resistance Reversal— Founder @ MetThrive Method @OjaisWellness💪🏽 Views not medical advice🇺🇸🇬🇧
Kulvinder Kaur MD @dockaurG
250K Followers 653 Following Physician. Scientist. Patient HumanRights Advocate. President & CoFounder @OnCall4ON. Advisory Board @FSU_Canada. Team Humanity. Cupcake Connoisseur. My Ethos.
Jennifer Sey @JenniferSey
192K Followers 907 Following Founder & CEO of XX-XY Athletics. Author of "Levi's Unbuttoned" & "Chalked Up." Email: [email protected]
Jenin Younes @JeninYounesEsq
149K Followers 2K Following National legal director @adc. Cancelled by left for covid views & right for Palestine views. Retweets not=endorsements. Cohost of @prevprohibited podcast
Vinay Prasad MD MPH @VPrasadMDMPH
312K Followers 4K Following These posts were issued before my FDA employment and do not necessarily represent the views of the FDA or the United States. The account is now inactive.
Bokai Zhu @ZhuBokai
72 Followers 35 Following
Biology+AI Daily @BiologyAIDaily
14K Followers 266 Following Protein/Antibody Designer, AI for drug design, Deep learning and large language model. Share daily papers on biology + AI
Alexandr Wang @alexandr_wang
333K Followers 838 Following chief ai officer @meta, founder @scale_ai. rational in the fullness of time
Molecular Plant & Pla... @MPlantPCom
13K Followers 453 Following Journals Publishing Exciting Research in Plant Sciences. https://t.co/TTlSiDg8q4 https://t.co/spbifLA9Nr
bioRxiv Plant Bio @biorxiv_plants
16K Followers 0 Following
Yulong Li Lab @yulonglilab
5K Followers 812 Following Yulong Li: PKU (BS, Beijing) - Duke Univ. (PhD, Durham) - Stanford Univ. (Postdoc, Palo Alto) - PKU (Prof. , Beijing)
Max Wilkinson @maxewilkinson
3K Followers 195 Following PhD @MRC_LMB, now post-doc at @MIT, dabbler in cryoEM. Keen on spliceosomes. Now also keen on reverse transcription. Kiwi.
Mary Elizabeth @meharpist
4K Followers 996 Following I’m a harpist and scientist, working as an editor for @nature when I’m not making music, biking or skiing. All views are my own.
Jonathan Terrett @jonterrett
91 Followers 56 Following soccer, Harry Potter, oncology drug development, hard rock, catalyst, puppeteer
Linlin Fan @LinlinZFan
1K Followers 496 Following Assistant Professor @MIT, https://t.co/xtJMaRvRAq, Recruiting, Postdoc @Stanford, PhD @Harvard, feminist, all-optical physiology, learning and memory
Menglei Shuai @MengleiS
65 Followers 104 Following Interested in human microbiome, multi-omics and computational medicine | Postdoc | Broad Institute of MIT and Harvard @TheXavierLab